RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 NECAP2Q9NVZ3 263 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ZDHHC8Q9ULC8 765 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 MMP24Q9Y5R2 645 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ANKUB1A6NFN9 424 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ETV2O00321 342 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 HLA-DOBP13765 273 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SERPINA2P20848 420 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 FHITP49789 147 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 RND3P61587 244 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 EWSR1Q01844 656 aaKnown RBP eCLIP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 PLCXD2Q0VAA5 305 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 HLA-DQA1Q5Y7H0 255 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 POMZP3Q6PJE2 187 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ABHD12BQ7Z5M8 362 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 AVL9Q8NBF6 648 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR10AD1Q8NGE0 317 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR2AJ1Q8NGZ0 328 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 PP6455Q8WZ26 134 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 MMABQ96EY8 250 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 LURAP1Q96LR2 239 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SLC25A31Q9H0C2 315 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 PARP12Q9H0J9 701 aaKnown RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SH3BGRL3Q9H299 93 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ALKBH4Q9NXW9 302 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 DKKL1Q9UK85 242 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 IGKV1D-43A0A0B4J1Z2 117 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 SMCO3A2RU48 225 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 CDRT15L2A8MXV6 281 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 PHOX2AO14813 284 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 SCGB1D2O95969 90 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF728P0DKX0 622 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 CSNK1A1P48729 337 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 PIGPP57054 158 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF121P58317 390 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ERVFRD-1P60508 538 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 PPP1CAP62136 330 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 H3F3AP84243 136 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 BAXQ07812 192 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ICAM4Q14773 271 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 HLA-BQ31612 363 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ACSF3Q4G176 576 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-205ENST00000357568 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
CAPN3-205ENST00000357568 OR2T2Q6IF00 324 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 FBXL14Q8N1E6 418 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF441Q8N8Z8 693 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 OR6X1Q8NH79 312 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 GPR61Q9BZJ8 451 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 LHFPL6Q9Y693 200 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 IGKV1-9A0A0C4DH69 117 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 PATE3B3GLJ2 98 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 C9J4A7 227 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 GIMD1P0DJR0 217 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 EDN3P14138 238 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 HLA-DRB3P79483 266 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 KISS1Q15726 138 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 FAM185AQ8N0U4 392 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF321PQ8N8H1 164 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
CAPN3-205ENST00000357568 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 RHOVQ96L33 236 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 RARRES2Q99969 163 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 NDUFAF3Q9BU61 184 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 FOXD3Q9UJU5 478 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-205ENST00000357568 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 WSB1Q9Y6I7 421 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 V9GYS6 101 aa9.29□□□□□ -0.92
CAPN3-205ENST00000357568 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 A0A0U1RQV5 110 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 A0A1W2PP11 408 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PIAS2O75928 621 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 C1QL1O75973 258 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR5H8P0DN80 308 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CTSEP14091 401 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 EPHA8P29322 1005 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 MTCP1P56278 107 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 POU3F1Q03052 451 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TLE4Q04727 773 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 SHBQ15464 509 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 LCN10Q6JVE6 187 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 RNF144BQ7Z419 303 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR2C3Q8N628 320 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PLPP5Q8NEB5 264 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR2G3Q8NGZ4 309 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 RTN4IP1Q8WWV3 396 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PATE1Q8WXA2 126 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 DDIT4LQ96D03 193 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 SPIN2AQ99865 258 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 SPIN2BQ9BPZ2 258 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 WWTR1Q9GZV5 400 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PLEKHF2Q9H8W4 249 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms