RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM117AQ9C073 453 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 NPDC1Q9NQX5 325 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ZFP30Q9Y2G7 519 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 MPC1Q9Y5U8 109 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 A8MWL6 223 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 H3BMH7 237 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 CA7P43166 264 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 GPM6AP51674 278 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 NNATQ16517 81 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 TP53RKQ96S44 253 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 MIXL1Q9H2W2 232 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 IL23AQ9NPF7 189 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 OSGIN2Q9Y236 505 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 A6NIN4 97 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 CD82P27701 267 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 PRSS36Q5K4E3 855 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 PWWP2BQ6NUJ5 590 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF611Q8N823 705 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 OR2I1PQ8NGU4 316 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF729A6NN14 1252 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SCGB1C2P0DMR2 95 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SELENOTP62341 195 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 LEMD1Q68G75 181 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 FDX2Q6P4F2 183 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SPACA9Q96E40 222 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SGIP1Q9BQI5 828 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 COX7A2P2O60397 106 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 MPGP29372 298 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 FMODQ06828 376 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 PQLC2Q6ZP29 291 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 BPIFA4PQ86YQ2 179 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 TAAR3PQ9P1P4 343 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ST3GAL6Q9Y274 331 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 CLLU1OSQ5K130 101 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 OR1L4Q8NGR5 311 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ROBO4Q8WZ75 1007 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SP1P08047 785 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 ELLP55199 621 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM33P57088 247 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 MSRB3Q8IXL7 192 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 OR1L6Q8NGR2 347 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 OR6X1Q8NH79 312 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 SOX21Q9Y651 276 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-202ENST00000357162 DSCAML1Q8TD84 2053 aa5.88□□□□□ -1.47
VPS13B-202ENST00000357162 NPIPB9F8W1W9 429 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TNFRSF1AP19438 455 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TESK1Q15569 626 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF596Q8TC21 504 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PEF1Q9UBV8 284 aaKnown RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 COL18A1P39060 1754 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 A0A1W2PR48 441 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 NTF3P20783 257 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PAQR6Q6TCH4 344 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 LIAT1Q6ZQX7 453 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ATOH1Q92858 354 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 GPR61Q9BZJ8 451 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 RAB33BQ9H082 229 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SIRT3Q9NTG7 399 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 NPTNQ9Y639 398 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 LOC390937A0A1W2PQ73 354 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TCRBV21S2A2A0A5A6 115 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SIRT6Q8N6T7 355 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SNX22Q96L94 193 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 UPK1AO00322 258 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CDC34P49427 236 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 GNG3P63215 75 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 KCNMB1Q16558 191 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CHRNA10Q9GZZ6 450 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 A0A0U1RQV5 110 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 M0R2Z0 102 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 P2RY10O00398 339 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CD38P28907 300 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 HOXC5Q00444 222 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ROM1Q03395 351 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 LCN15Q6UWW0 184 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 ZNF547Q8IVP9 402 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PCNPQ8WW12 178 aaKnown RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PRNDQ9UKY0 176 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PLXNB2O15031 1838 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TUSC2O75896 110 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SBK3P0C264 359 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SLC38A11Q08AI6 406 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PAQR9Q6ZVX9 377 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM179BQ7Z7N9 219 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 TMEM130Q8N3G9 435 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 YARS2Q9Y2Z4 477 aaKnown RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 SLC2A10O95528 541 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 WNT3P56703 355 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 VMA21Q3ZAQ7 101 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 OR1F12Q8NHA8 337 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 PLSCR3Q9NRY6 295 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CFDP00746 253 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CBR1P16152 277 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 GJA4P35212 333 aa5.87□□□□□ -1.47
VPS13B-202ENST00000357162 CCR2P41597 374 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms