RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SLIRPQ9GZT3 109 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 ATRQ13535 2644 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TMEM272A0A1B0GTI8 110 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 OR5B21A6NL26 309 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RNF223E7ERA6 249 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SLC17A2O00624 439 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 HSPB6O14558 160 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SOCS1O15524 211 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PHF1O43189 567 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 PEX14O75381 377 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GOSR1O95249 250 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 IGHV2-70P01814 119 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 HEXAP06865 529 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SERPINA2P20848 420 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GABRA2P47869 451 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ATP1B3P54709 279 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 TMBIM6P55061 237 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MRPS15P82914 257 aaKnown RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 TESK1Q15569 626 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 CLEC12BQ2HXU8 276 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 Q5PR19 223 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ACP7Q6ZNF0 438 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 C17orf107Q6ZR85 190 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 Q8NFD4 153 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ANGPTL6Q8NI99 470 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RDH5Q92781 318 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GCDHQ92947 438 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 FAM3DQ96BQ1 224 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SLC25A38Q96DW6 304 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RBMXL1Q96E39 390 aaKnown RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 DCTN5Q9BTE1 182 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 CHST6Q9GZX3 395 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SLC22A4Q9H015 551 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RNF7Q9UBF6 113 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 OR14J1Q9UGF5 321 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ZNF222Q9UK12 451 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MRPS28Q9Y2Q9 187 aaKnown RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 TRAV24A0A0B4J272 114 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 TMEM82A0PJX8 343 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 TMEM14DPA8MWL7 114 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 FAM157AC9JC47 383 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 J3QT63 122 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 NOS1APO75052 506 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 BMXP51813 675 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ART1P52961 327 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RSU1Q15404 277 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 TRAM1Q15629 374 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PCGF3Q3KNV8 242 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PLAC9Q5JTB6 97 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 IDNKQ5T6J7 187 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 AWAT2Q6E213 333 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 Q6P435 159 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GDPGP1Q6ZNW5 385 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 DCDC5Q6ZRR9 648 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 LHFPL2Q6ZUX7 228 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 LRRC28Q86X40 367 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 ZNF573Q86YE8 665 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 ZSCAN4Q8NAM6 433 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 POC1AQ8NBT0 407 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PHYHIPQ92561 330 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 THRSPQ92748 146 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 Q96MF0 132 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 LPAR5Q9H1C0 372 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MIXL1Q9H2W2 232 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 HMG20AQ9NP66 347 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MMP26Q9NRE1 261 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 OR2AT4A6NND4 320 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 FOXI3A8MTJ6 420 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 NOTOA8MTQ0 251 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 AIPO00170 330 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RGS5O15539 181 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 NXPH2O95156 264 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 HTR3BO95264 441 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PRKACAP17612 351 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PRKACBP22694 351 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GLRA1P23415 457 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 BTG1P62324 171 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 GLT8D1Q68CQ7 371 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MKXQ8IYA7 352 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 IZUMO1Q8IYV9 350 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 SPERTQ8NA61 448 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 LGALS14Q8TCE9 139 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 NEU4Q8WWR8 484 aaPredicted RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 HPS1Q92902 700 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 MBD6Q96DN6 1003 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 CEP19Q96LK0 163 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 CHODLQ9H9P2 273 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 FN3KRPQ9HA64 309 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 LPAR2Q9HBW0 351 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 FBLN5Q9UBX5 448 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 RSL24D1Q9UHA3 163 aaKnown RBP3.35□□□□□ -1.87
LIG4-201ENST00000356922 ST3GAL6Q9Y274 331 aa3.35□□□□□ -1.87
LIG4-201ENST00000356922 PPIAL4EA0A075B759 164 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TMEM210A6NLX4 147 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 CEACAM18A8MTB9 384 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PPIAL4DF5H284 164 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TRAPPC2LH3BP13 241 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 SMAD7O15105 426 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms