RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF658BQ4V348 819 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 MOGAT3Q86VF5 341 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TGIF2LXQ8IUE1 241 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PTP4A1Q93096 173 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 UBE2MP61081 183 aaKnown RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PDZD11Q5EBL8 140 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 OVCH2Q7RTZ1 564 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GMPPAQ96IJ6 420 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF426Q9BUY5 554 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 CXCL16Q9H2A7 254 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TRAPPC1Q9Y5R8 145 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 A0A0A6YYJ9 748 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TRAV1-2A0A0B4J238 106 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 ZAR1LA6NP61 321 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 SHISA8B8ZZ34 492 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GLI4P10075 376 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GABRB1P18505 474 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PMCHP20382 165 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 NAAAQ02083 359 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM179BQ7Z7N9 219 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 C9orf62Q8N4C0 152 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 OR2I1PQ8NGU4 316 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF707Q96C28 371 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 MS4A5Q9H3V2 200 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 SH2D2AQ9NP31 389 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TMED3Q9Y3Q3 217 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 SCN9AQ15858 1988 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 LSM11P83369 360 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM128Q5BJH2 165 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GGNBP1Q5YKI7 109 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM116Q8NCL8 245 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 UBE2FQ969M7 185 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TEX37Q96LM6 180 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 SMOC1Q9H4F8 434 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PRKNO60260 465 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 HAND1O96004 215 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 ADRB1P08588 477 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PGA3P0DJD8 388 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GALNSP34059 522 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GALR1P47211 349 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 HNRNPA3P51991 378 aaKnown RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 PDZK1IP1Q13113 114 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 OR13C5Q8NGS8 318 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 GPR137Q96N19 417 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 TECRQ9NZ01 308 aaKnown RBP4.92□□□□□ -1.62
PTPRD-202ENST00000356435 CLN8Q9UBY8 286 aa4.92□□□□□ -1.62
PTPRD-202ENST00000356435 HSBP1O75506 76 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 HTN1P15515 57 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 C19orf54Q5BKX5 351 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 EBLN2Q6P2I7 272 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SLC25A42Q86VD7 318 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 C20orf196Q8IYI0 205 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 STPG2Q8N412 459 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 DOK5Q9P104 306 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 VSIG4Q9Y279 399 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM210A6NLX4 147 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PHOX2AO14813 284 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 OR5AL1P0C617 328 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF32P17041 273 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PI3P19957 117 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 MAGEA5P43359 124 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 GPNMBQ14956 572 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 GUCA2BQ16661 112 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ATP6V1FQ16864 119 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 KHDC3LQ587J8 217 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SPINK14Q6IE38 97 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 LINC00596Q86U02 117 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 C1orf174Q8IYL3 243 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 NUBPLQ8TB37 319 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 R3HDM4Q96D70 268 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SDHCQ99643 169 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ADGRL4Q9HBW9 690 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PRNDQ9UKY0 176 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 A0A1W2PRD5 423 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 A0A1W2PRF3 423 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 A0A1W2PRM7 423 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 IGSF23A1L1A6 192 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 MGPP08493 103 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CD1BP29016 333 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CDC34P49427 236 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 EVX1P49640 407 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 B2MP61769 119 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 GAMTQ14353 236 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 VAMP3Q15836 100 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TSPAN32Q96QS1 320 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 GDF15Q99988 308 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 C20orf141Q9NUB4 165 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 DNAJB12Q9NXW2 375 aaKnown RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 NAT8BQ9UHF3 227 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ING1Q9UK53 422 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 BOLA1Q9Y3E2 137 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 C3orf85A0A1B0GTC6 90 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SOX15O60248 233 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PNPP00491 289 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ORM2P19652 201 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms