RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
RTN3-205ENST00000356000 ARF6P62330 175 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 TUBG2Q9NRH3 451 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 FBLN5Q9UBX5 448 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 MRPS28Q9Y2Q9 187 aaKnown RBP13.76□□□□□ -0.21
RTN3-205ENST00000356000 EPOPA6NHQ4 379 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 SDCBPO00560 298 aaPredicted RBP13.76□□□□□ -0.21
RTN3-205ENST00000356000 SMPD2O60906 423 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 PITX3O75364 302 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 AMY2BP19961 511 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 CDKN1AP38936 164 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 MTCP1P56278 107 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 CSNK1G2P78368 415 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 RHOGP84095 191 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 ADIRFQ15847 76 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 ABHD17CQ6PCB6 329 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
RTN3-205ENST00000356000 OR2M7Q8NG81 312 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 OR2T10Q8NGZ9 312 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 CMTM2Q8TAZ6 248 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 TMEM56Q96MV1 263 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 NICN1Q9BSH3 213 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
RTN3-205ENST00000356000 C17orf105B2RV13 164 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 GPR89AB7ZAQ6 455 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 STATHP02808 62 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 GPR89BP0CG08 455 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 TNFSF4P23510 183 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 TPPP2P59282 170 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
RTN3-205ENST00000356000 DEFB103AP81534 67 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 ZIC1Q15915 447 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 PLAC9Q5JTB6 97 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 LPAR5Q9H1C0 372 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 HHLA2Q9UM44 414 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
RTN3-205ENST00000356000 CACNA1CQ13936 2221 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 FANCMQ8IYD8 2048 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 CRYM-AS1A6NIL9 109 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 TMEM14DPA8MWL7 114 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 HNRNPA3P51991 378 aaKnown RBP13.75□□□□□ -0.21
RTN3-205ENST00000356000 EMP2P54851 167 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 CLDN18P56856 261 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 FOXK1P85037 733 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 GPM6BQ13491 265 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 NPAS4Q8IUM7 802 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 GNPNAT1Q96EK6 184 aaPredicted RBP13.75□□□□□ -0.21
RTN3-205ENST00000356000 PRSS50Q9UI38 385 aa13.75□□□□□ -0.21
RTN3-205ENST00000356000 HIST1H1DP16402 221 aaKnown RBP13.74□□□□□ -0.21
RTN3-205ENST00000356000 GCH1P30793 250 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 RPL15P61313 204 aaKnown RBP13.74□□□□□ -0.21
RTN3-205ENST00000356000 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 CTHRC1Q96CG8 243 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 MACROD1Q9BQ69 325 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 A0A0A6YYD4 124 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 K7ERU9 68 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 ITPRIPL2Q3MIP1 535 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 C1orf140Q5VVS0 124 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 C22orf39Q6P5X5 142 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 LRRC25Q8N386 305 aaPredicted RBP13.74□□□□□ -0.21
RTN3-205ENST00000356000 ZNF709Q8N972 641 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 LRRC75AQ8NAA5 344 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 ABHD3Q8WU67 409 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 WFDC12Q8WWY7 111 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 BET1LQ9NYM9 111 aa13.74□□□□□ -0.21
RTN3-205ENST00000356000 VSTM2BA6NLU5 285 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 RAD51DO75771 328 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 JMJD7P0C870 316 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 IGLC2P0DOY2 106 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 IGLC3P0DOY3 106 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 HSD11B1P28845 292 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 BLKP51451 505 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 TAS2R46P59540 309 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 BSXQ3C1V8 233 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 Q6ZN92 141 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 OR5L1Q8NGL2 311 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 VN1R1Q9GZP7 353 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 MANBALQ9NQG1 85 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 MKI67P46013 3256 aaKnown RBP13.73□□□□□ -0.21
RTN3-205ENST00000356000 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 ZFP92A6NM28 416 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 H7C1C5 153 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 HYPMO75409 117 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 VAMP5O95183 116 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 CTSDP07339 412 aaPredicted RBP13.73□□□□□ -0.21
RTN3-205ENST00000356000 H2BFMP0C1H6 154 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 SRP14P37108 136 aaKnown RBP13.73□□□□□ -0.21
RTN3-205ENST00000356000 LCN6P62502 163 aa13.73□□□□□ -0.21
RTN3-205ENST00000356000 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms