RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PLPP3O14495 311 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 HPP00738 406 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 FGF2P09038 288 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SLC25A4P12235 298 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 APOBEC1P41238 236 aaKnown RBP12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SLC25A1P53007 311 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 EGR4Q05215 589 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 CEBPEQ15744 281 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 LIPHQ8WWY8 451 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SLC25A38Q96DW6 304 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 ACACAQ13085 2346 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 CELA2AP08217 269 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 NXPH1P58417 271 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 DLK1P80370 383 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 MPV17LQ2QL34 196 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 FLVCR1-AS1Q8TAF5 88 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SAT2Q96F10 170 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-202ENST00000355815 ALKBH3Q96Q83 286 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-202ENST00000355815 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 CNTD2Q9H8S5 307 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 MTCH2Q9Y6C9 303 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 OR5H15A6NDH6 313 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 OR5H1A6NKK0 313 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 PRR32B1ATL7 298 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 GSTZ1O43708 216 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-202ENST00000355815 CALCRP30988 508 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 SCGB2A2Q13296 93 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 HABP2Q14520 560 aaPredicted RBP12.44□□□□□ -0.42
SREBF1-202ENST00000355815 NSUN5P2Q63ZY6 315 aa12.44□□□□□ -0.42
SREBF1-202ENST00000355815 C20orf202A1L168 122 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 LRP5LA4QPB2 252 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 POU2F2P09086 479 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 ERVK-16P61578 105 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF92Q03936 586 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 C2orf68Q2NKX9 166 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 HLA-BQ31612 363 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 RTL6Q6ICC9 239 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 SLC43A2Q8N370 569 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 MVB12AQ96EY5 273 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 SCARF2Q96GP6 870 aaPredicted RBP12.43□□□□□ -0.42
SREBF1-202ENST00000355815 IP6K3Q96PC2 410 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 A0A096LPE4 126 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 A0A1W2PPZ6 126 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 CTDSP1Q9GZU7 261 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 SFT2D2O95562 160 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 CCL4P13236 92 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 MSMO1Q15800 293 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 CALHM2Q9HA72 323 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 PCNX1Q96RV3 2341 aa12.43□□□□□ -0.42
SREBF1-202ENST00000355815 H3BQ15 152 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 TMEM267Q0VDI3 215 aaPredicted RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF684Q5T5D7 378 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 CDC20BQ86Y33 519 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 PLPPR2Q96GM1 343 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 OR5AC2Q9NZP5 309 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 A0A1W2PP11 408 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 KLK2P20151 261 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 RPS4Y1P22090 263 aaKnown RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 EFNB1P98172 346 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ACER2Q5QJU3 275 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 LINC01590Q5TEZ4 76 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ZDHHC22Q8N966 263 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 IFI44Q8TCB0 444 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 SLC39A7Q92504 469 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 NAT6Q93015 286 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 MARVELD3Q96A59 401 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 TRAPPC1Q9Y5R8 145 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 SOCS1O15524 211 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 SSR4P51571 173 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 LIMK1P53667 647 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 RRADP55042 308 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 SRPXP78539 464 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 SLC25A45Q8N413 288 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 NANOS1Q8WY41 292 aaKnown RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 DUSP15Q9H1R2 295 aaPredicted RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 DOK5Q9P104 306 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 FAM166BA8MTA8 275 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 DNASE2O00115 360 aaPredicted RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 CXCL13O43927 109 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
SREBF1-202ENST00000355815 ASB5Q8WWX0 329 aa12.42□□□□□ -0.42
SREBF1-202ENST00000355815 TNFSF11O14788 317 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms