RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MRPL37Q9BZE1 423 aaKnown RBP13.23□□□□□ -0.29
LMX1B-201ENST00000355497 PRDM7Q9NQW5 492 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM265A0A087WTH1 108 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 DNPH1O43598 174 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 SRP14P37108 136 aaKnown RBP13.22□□□□□ -0.29
LMX1B-201ENST00000355497 RAE1P78406 368 aaKnown RBP13.22□□□□□ -0.29
LMX1B-201ENST00000355497 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMX1B-201ENST00000355497 RIGQ13278 110 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 HLA-BQ31612 363 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM196Q5HYL7 178 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 MYEOVQ96EZ4 313 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
LMX1B-201ENST00000355497 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ACTL6AO96019 429 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 HPXP02790 462 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ANKRD37Q7Z713 158 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 CNTD2Q9H8S5 307 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 A0A1B0GTL3 188 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ANKRD20A5PA0PJZ0 165 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 IGSF23A1L1A6 192 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 HMSDA8MTL9 139 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 EDIL3O43854 480 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 ZFPL1O95159 310 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 DLX1P56177 255 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 INSL4Q14641 139 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 HIST3H3Q16695 136 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 COA4Q9NYJ1 87 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 OR6C3Q9NZP0 311 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 P01737 135 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 LGALS7P47929 136 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 FOXC1Q12948 553 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 NKG7Q16617 165 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 OR10G8Q8NGN5 311 aa13.22□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM33P57088 247 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF385DQ9H6B1 395 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 SIRT5Q9NXA8 310 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.29
LMX1B-201ENST00000355497 B4GALNT1Q00973 533 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 ANGPTL4Q9BY76 406 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 MEX3AA1L020 520 aaKnown RBP13.21□□□□□ -0.29
LMX1B-201ENST00000355497 C11orf94C9JXX5 98 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 MFNGO00587 321 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF253O75346 499 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 CTSDP07339 412 aaPredicted RBP13.21□□□□□ -0.29
LMX1B-201ENST00000355497 G6PCP35575 357 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 TRA2AQ13595 282 aaKnown RBP eCLIP13.21□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM108Q6UXF1 575 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 SLC16A13Q7RTY0 426 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 R3HDM4Q96D70 268 aa13.21□□□□□ -0.29
LMX1B-201ENST00000355497 SERTM1A2A2V5 107 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 FAM90A27PA6NNH2 459 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 M0QZK8 103 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 GGCTO75223 188 aaKnown RBP13.21□□□□□ -0.3
LMX1B-201ENST00000355497 MELTFP08582 738 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 CEBPDP49716 269 aaPredicted RBP13.21□□□□□ -0.3
LMX1B-201ENST00000355497 OR5R1Q8NH85 324 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 VSTM2AQ8TAG5 236 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 LIPGQ9Y5X9 500 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 FZD5Q13467 585 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 SSX1Q16384 188 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF683Q8IZ20 524 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 D2HGDHQ8N465 521 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 KCNK15Q9H427 330 aa13.21□□□□□ -0.3
LMX1B-201ENST00000355497 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 GCSHP23434 173 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 TCL1AP56279 114 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 AWAT1Q58HT5 328 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 STARD10Q9Y365 291 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 TAS2R60P59551 318 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 XAF1Q6GPH4 301 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 OR5B21A6NL26 309 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 TBX19O60806 448 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 SDHBP21912 280 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 CST9Q5W186 159 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
LMX1B-201ENST00000355497 OR10D3Q8NH80 312 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
LMX1B-201ENST00000355497 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 PACRGQ96M98 296 aaPredicted RBP13.2□□□□□ -0.3
LMX1B-201ENST00000355497 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 R3HDMLQ9H3Y0 253 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 C2CD4DB7Z1M9 353 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF547Q8IVP9 402 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 PERPQ96FX8 193 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 IL17BQ9UHF5 180 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
LMX1B-201ENST00000355497 B4DEV8 164 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 TRDCB7Z8K6 153 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms