RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LURAP1Q96LR2 239 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 MRPS11P82912 194 aaKnown RBP15.95■□□□□ 0.14
COL18A1-202ENST00000355480 MIDNQ504T8 468 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 TUBAL3A6NHL2 446 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 LIPT2A6NK58 231 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 CST4P01036 141 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 GALP22466 123 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 RPL13AP40429 203 aaKnown RBP15.95■□□□□ 0.14
COL18A1-202ENST00000355480 CRYBB2P43320 205 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 GAB4Q2WGN9 574 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 MYPOPQ86VE0 399 aaPredicted RBP15.95■□□□□ 0.14
COL18A1-202ENST00000355480 MOGAT3Q86VF5 341 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 COA4Q9NYJ1 87 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 TRAPPC4Q9Y296 219 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 SMRP1Q8NCR6 262 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 C17orf47Q8NEP4 570 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 OIT3Q8WWZ8 545 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 ZNF205O95201 554 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 GYPAP02724 150 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 ORM2P19652 201 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 RAB5AP20339 215 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 SELENOPP49908 381 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 C1QL3Q5VWW1 255 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 TMEM88Q6PEY1 159 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 CD300LDQ6UXZ3 194 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 NOL4LQ96MY1 436 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-202ENST00000355480 CACNA1CQ13936 2221 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 EML2O95834 649 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 DHRS2Q13268 280 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 OR4S2Q8NH73 311 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 ZNF716A6NP11 495 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 PNPP00491 289 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 OR5AC1P0C628 307 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 CCL3P10147 92 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 CD82P27701 267 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 TGIF2LXQ8IUE1 241 aa15.94■□□□□ 0.14
COL18A1-202ENST00000355480 DUSP15Q9H1R2 295 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-202ENST00000355480 FOXB2Q5VYV0 432 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 C5orf67F2Z3F1 127 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 GGNBP1Q5YKI7 109 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 ADTRPQ96IZ2 230 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 LRP5O75197 1615 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 FAM24AA6NFZ4 105 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 SFTA3P0C7M3 94 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 PECRQ9BY49 303 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 CD160O95971 181 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 SP1P08047 785 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 HMGA2P52926 109 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 CLPPQ16740 277 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-202ENST00000355480 NTMQ9P121 344 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 TINAGQ9UJW2 476 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 C9orf170A2RU37 121 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 RNASEK-C17orf49H0YIS7 233 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 PSG6Q00889 435 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 RAB32Q13637 225 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 GUK1Q16774 197 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 ZNF770Q6IQ21 691 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-202ENST00000355480 POMT1Q9Y6A1 747 aa15.93■□□□□ 0.14
COL18A1-202ENST00000355480 KIR2DL1P43626 348 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-202ENST00000355480 VSTM2AQ8TAG5 236 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 GPR27Q9NS67 375 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 NHSL1Q5SYE7 1610 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 GNG4P50150 75 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MESTQ5EB52 335 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MAP6Q96JE9 813 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 CROCCQ5TZA2 2017 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MAP1LC3B2A6NCE7 125 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 SCAND1P57086 179 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 ATG4DQ86TL0 474 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-202ENST00000355480 TCTE3Q8IZS6 198 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MUC20Q8N307 709 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-202ENST00000355480 RASL11BQ9BPW5 248 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MAP1LC3BQ9GZQ8 125 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 WDR13Q9H1Z4 485 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 MRM2Q9UI43 246 aaKnown RBP15.92■□□□□ 0.14
COL18A1-202ENST00000355480 TRAPPC1Q9Y5R8 145 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 CDIPTO14735 213 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 SPINT1O43278 529 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 PMCHP20382 165 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 ABHD3Q8WU67 409 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 HAND1O96004 215 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 CST2P09228 141 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 LSM6P62312 80 aaKnown RBP15.92■□□□□ 0.14
COL18A1-202ENST00000355480 OR8D4Q8NGM9 314 aa15.92■□□□□ 0.14
COL18A1-202ENST00000355480 SPINK4O60575 86 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 TPPP2P59282 170 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 DCAF10Q5QP82 559 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 OR1B1Q8NGR6 318 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 RNF7Q9UBF6 113 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 GVQW1Q8N7I0 195 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 HRKO00198 91 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 FLRT3Q9NZU0 649 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 OOEPA6NGQ2 149 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 CDC34P49427 236 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-202ENST00000355480 LIAT1Q6ZQX7 453 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 ZBTB44Q8NCP5 570 aa15.91■□□□□ 0.14
COL18A1-202ENST00000355480 HIKESHIQ53FT3 197 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 CCL21O00585 134 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms