RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MAPK1P28482 360 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 CSNK1A1P48729 337 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 NRG3P56975 720 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PPP3R1P63098 170 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SLC35B1P78383 322 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PSG4Q00888 419 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SLC51BQ86UW2 128 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TOMM40LQ969M1 308 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 MSI2Q96DH6 328 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 ZNF607Q96SK3 696 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 NRIP2Q9BQI9 281 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 C11orf1Q9H5F2 150 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 RAB22AQ9UL26 194 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 ZNF705EA8MWA4 302 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 SLC17A2O00624 439 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 NKX2-8O15522 239 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 PGA3P0DJD8 388 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TFPI2P48307 235 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PPP1CBP62140 327 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SRSF4Q08170 494 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 FOXF2Q12947 444 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 Q499Y3 187 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 C4orf46Q504U0 113 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PRR30Q53SZ7 412 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 WIPI1Q5MNZ9 446 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 GGNQ86UU5 652 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 OR5M8Q8NGP6 311 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 OR4K15Q8NH41 348 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 C17orf50Q8WW18 174 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 FAM168AQ92567 244 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 FCGR1BQ92637 280 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 ZDHHC16Q969W1 377 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 HIST1H2BAQ96A08 127 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 NECAP2Q9NVZ3 263 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TGIF2-C20orf24A0A0A6YYL0 155 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 FAM24AA6NFZ4 105 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SGCEO43556 437 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 CLN5O75503 358 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 MT-ND5P03915 603 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 S100A1P23297 94 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TMEM33P57088 247 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 GAMTQ14353 236 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 EXT1Q16394 746 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 DCAF10Q5QP82 559 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SLC16A9Q7RTY1 509 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 OVCH1Q7RTY7 1134 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 C19orf47Q8N9M1 422 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 CDRT4Q8N9R6 151 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 OR2T27Q8NH04 317 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 SH2D2AQ9NP31 389 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 IFT46Q9NQC8 304 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 FBXL17Q9UF56 701 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TP53TG5Q9Y2B4 290 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 STK17BO94768 372 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 IGHV2-70P01814 119 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 IGHV2-5P01817 119 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PRKAR1AP10644 381 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 ZNF43P17038 809 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PTAFRP25105 342 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 TALDO1P37837 337 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 UCP3P55916 312 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PSMA6P60900 246 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 RPS23P62266 143 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 FOXO1Q12778 655 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 IKBIPQ70UQ0 350 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 RRM2BQ7LG56 351 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 ABHD12BQ7Z5M8 362 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 SKA3Q8IX90 412 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 RPP25LQ8N5L8 163 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 OR10AD1Q8NGE0 317 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 Q8WTZ3 238 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 AQP3Q92482 292 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 OSTF1Q92882 214 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 PIK3IP1Q96FE7 263 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 CACYBPQ9HB71 228 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 SLC7A10Q9NS82 523 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 COPZ2Q9P299 210 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 LSM4Q9Y4Z0 139 aaKnown RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 MEGF11A6BM72 1044 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 OR10H2O60403 315 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 OR5AC1P0C628 307 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 FXYD4P59646 89 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 LSM6P62312 80 aaKnown RBP4.71□□□□□ -1.65
CD47-201ENST00000355354 IGLV3-21P80748 117 aaPredicted RBP4.71□□□□□ -1.65
CD47-201ENST00000355354 DYRK1AQ13627 763 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 PON3Q15166 354 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 VWA1Q6PCB0 445 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 MAMDC2Q7Z304 686 aaPredicted RBP4.71□□□□□ -1.65
CD47-201ENST00000355354 OR5AK2Q8NH90 309 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 HYLS1Q96M11 299 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 ZNF780BQ9Y6R6 833 aa4.71□□□□□ -1.65
CD47-201ENST00000355354 LRRC3CA6NJW4 275 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 M0QZ24 198 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SLC35E2P0CK97 266 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 APELAP0DMC3 54 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 CNR1P21554 472 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 CFPP27918 469 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 CDH26Q8IXH8 852 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms