RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NDRG2Q9UN36 371 aaKnown RBP1.15□□□□□ -2.23
BRCA1-202ENST00000354071 OTOGLQ3ZCN5 2332 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 MBD5Q9P267 1494 aa1.15□□□□□ -2.23
BRCA1-202ENST00000354071 CCNB3Q8WWL7 1395 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SPTAN1Q13813 2472 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 MAP3K15Q6ZN16 1313 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 FAT2Q9NYQ8 4349 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RSPH10B2B2RC85 870 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 GABARAPO95166 117 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 LYPLA2O95372 231 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ATP6V1G2O95670 118 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TTC4O95801 387 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 FADS2O95864 444 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 HPRT1P00492 218 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 INSP01308 110 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RSPH10BP0C881 870 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RAB5AP20339 215 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CXCL5P42830 114 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 EMP2P54851 167 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CTAG1AP78358 180 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 FCN2Q15485 313 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RNF212Q495C1 297 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CLEC18BQ6UXF7 455 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SPNS3Q6ZMD2 512 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 C11orf53Q8IXP5 236 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 C17orf78Q8N4C9 275 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM156Q8N614 296 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PPWD1Q96BP3 646 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PPP1R14BQ96C90 147 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PGLYRP3Q96LB9 341 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM56Q96MV1 263 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 QKIQ96PU8 341 aaKnown RBP eCLIP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 GPR22Q99680 433 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 MRPS26Q9BYN8 205 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ZSCAN16Q9H4T2 348 aaPredicted RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RHBDL2Q9NX52 303 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PTPRZ1P23471 2315 aaPredicted RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 IGKV3D-15A0A087WSY6 115 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV1-69DA0A0B4J2H0 117 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 LINC01619G3V211 115 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TOX3O15405 576 aaPredicted RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 GIMD1P0DJR0 217 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 COX5BP10606 129 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ERGP11308 486 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 AP1S2P56377 157 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TAS2R31P59538 309 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 OR2B8PP59922 312 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TTLL9Q3SXZ7 439 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 C6orf99Q4VX62 202 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ACTBL2Q562R1 376 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 HES5Q5TA89 166 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RESP18Q5W5W9 173 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SAXO2Q658L1 398 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ARL9Q6T311 187 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 BHLHA15Q7RTS1 189 aaPredicted RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 OR8J2Q8NGG1 315 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ACTL9Q8TC94 416 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 B3GALT6Q96L58 329 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 GINS4Q9BRT9 223 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CHAC1Q9BUX1 264 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CALN1Q9BXU9 219 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SLC38A1Q9H2H9 487 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 C12orf10Q9HB07 376 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CACYBPQ9HB71 228 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CRCT1Q9UGL9 99 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ORC6Q9Y5N6 252 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 KCNE3Q9Y6H6 103 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CDC42BPAQ5VT25 1732 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SBNO1A3KN83 1393 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM131Q92545 1883 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 A0A0B4J2A0 478 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 EPOPA6NHQ4 379 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 H3BP45 60 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ZW10O43264 779 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 EMC8O43402 210 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF806P0C7X5 589 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PSKH1P11801 424 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 HTR1EP28566 365 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 PFN2P35080 140 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ARL2P36404 184 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 MAGEA2P43356 314 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RPS10P46783 165 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ACOT2P49753 483 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ST3GAL4Q11206 333 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 KRR1Q13601 381 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 USF2Q15853 346 aaPredicted RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 C4orf26Q17RF5 130 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RWDD4Q6NW29 188 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM135Q86UB9 458 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 DCAF4L2Q8NA75 395 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 NPBQ8NG41 125 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 OR8G5Q8NG78 346 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CDC26Q8NHZ8 85 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 LZICQ8WZA0 190 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 UCN3Q969E3 161 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SMIM14Q96QK8 99 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF251Q9BRH9 671 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 NUDT9Q9BW91 350 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SLC17A9Q9BYT1 436 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms