RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PAX5Q02548 391 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 COL10A1Q03692 680 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 ZFP36L1Q07352 338 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 FBXW12Q6X9E4 464 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF573Q86YE8 665 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 TGIF2LYQ8IUE0 185 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 LINC00346Q8IVM7 164 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF283Q8N7M2 679 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 SSC4DQ8WTU2 575 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 ST8SIA1Q92185 356 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 FGF14Q92915 247 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 CYYR1Q96J86 154 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 CABLES2Q9BTV7 478 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 PECRQ9BY49 303 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 NAA60Q9H7X0 242 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 PNO1Q9NRX1 252 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 MYOTQ9UBF9 498 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 A0A1W2PP11 408 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 NPIPA5E9PKD4 350 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 TP53I11O14683 189 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 CEACAM1P13688 526 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 CTHP32929 405 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 TLE4Q04727 773 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 PLCXD2Q0VAA5 305 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 GNMTQ14749 295 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 LIAT1Q6ZQX7 453 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 THNSL2Q86YJ6 484 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 MAML2Q8IZL2 1156 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 OR52M1Q8NGK5 317 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 GNPNAT1Q96EK6 184 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 SPACA5Q96QH8 159 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 KLHDC3Q9BQ90 382 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 SDF2L1Q9HCN8 221 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 CENPMQ9NSP4 180 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 CBLN4Q9NTU7 201 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 P4HTMQ9NXG6 502 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 NPIPA1Q9UND3 350 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 FREM3P0C091 2139 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 XKRY2A2RUG3 117 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF878C9JN71 531 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 SOX15O60248 233 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 IGLV3-19P01714 112 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 NPSP0C0P6 89 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 OR4A8P0C604 315 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 PGA3P0DJD8 388 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 ALDH3B1P43353 468 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 PIGPP57054 158 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 HERPUD1Q15011 391 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 THEM4Q5T1C6 240 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 TEX38Q6PEX7 206 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 H1FNTQ75WM6 255 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 LYZL2Q7Z4W2 148 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 OR2C3Q8N628 320 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 OR51T1Q8NGJ9 327 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 HAS2Q92819 552 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 KLHL13Q9P2N7 655 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 COPS7AQ9UBW8 275 aa9.01□□□□□ -0.97
CHRNA1-202ENST00000348749 MS4A18H0YCH9 400 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 DBHP09172 617 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 MS4A18Q3C1V0 323 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 KIAA0895LQ68EN5 471 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 LGI3Q8N145 548 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF321PQ8N8H1 164 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 TMEM170AQ8WVE7 144 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 SLAMF6Q96DU3 332 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 TM2D1Q9BX74 207 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 WWTR1Q9GZV5 400 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 CISD1Q9NZ45 108 aaKnown RBP9□□□□□ -0.97
CHRNA1-202ENST00000348749 RFNGQ9Y644 331 aa9□□□□□ -0.97
CHRNA1-202ENST00000348749 IGKV1D-8A0A087WSZ0 117 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 ANKUB1A6NFN9 424 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 IGHV4-34P06331 123 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 CELA2BP08218 269 aaPredicted RBP8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 THEGLP0DJG4 465 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 FGF5P12034 268 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 BLVRBP30043 206 aaPredicted RBP8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 OR3A1P47881 315 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 ZNF774Q6NX45 483 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 POMZP3Q6PJE2 187 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 MSI2Q96DH6 328 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 GAL3ST4Q96RP7 486 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 VN1R1Q9GZP7 353 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 PLEKHF2Q9H8W4 249 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 CALHM2Q9HA72 323 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 CHST11Q9NPF2 352 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 LRFN1Q9P244 771 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 A0A1W2PNV4 684 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 FAM24AA6NFZ4 105 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 DHRS7CA6NNS2 312 aa8.99□□□□□ -0.97
CHRNA1-202ENST00000348749 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms