RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CCL4P13236 92 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 IL11P20809 199 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 FOXB1Q99853 325 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 CHRNA10Q9GZZ6 450 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 C12orf49Q9H741 205 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 OR5AC2Q9NZP5 309 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 ADAM20O43506 726 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 HOXA6P31267 233 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 ISOC2Q96AB3 205 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 ZNF251Q9BRH9 671 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
NUP50-201ENST00000347635 ZNF391Q9UJN7 358 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 LMX1BO60663 402 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 PGA3P0DJD8 388 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
NUP50-201ENST00000347635 OR5C1Q8NGR4 320 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 RSRP1Q9BUV0 290 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 RTL8AQ9BWD3 113 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 MMP24Q9Y5R2 645 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 WSB1Q9Y6I7 421 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 RCC1P18754 421 aaPredicted RBP12.97□□□□□ -0.33
NUP50-201ENST00000347635 C2orf68Q2NKX9 166 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 CEACAM16Q2WEN9 425 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 NECAP1Q8NC96 275 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 ZNF519Q8TB69 540 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 LHX4Q969G2 390 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 NLRC5Q86WI3 1866 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 AP4M1O00189 453 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 CTSBP07858 339 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 LSM6P62312 80 aaKnown RBP12.97□□□□□ -0.33
NUP50-201ENST00000347635 EGR4Q05215 589 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 GCM1Q9NP62 436 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 MYOFQ9NZM1 2061 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 A0A096LPE4 126 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 A0A1W2PPZ6 126 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 UCNP55089 124 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 ZNF774Q6NX45 483 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 ZNF573Q86YE8 665 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 SLC26A1Q9H2B4 701 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 AMDHD2Q9Y303 409 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 GBF1Q92538 1859 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 FGF5P12034 268 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 RAC1P63000 192 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 IGLV3-21P80748 117 aaPredicted RBP12.97□□□□□ -0.33
NUP50-201ENST00000347635 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 LINC00518Q8N0U6 118 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 SLC25A45Q8N413 288 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 C10orf35Q96D05 121 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 SMIM7Q9BQ49 75 aa12.97□□□□□ -0.33
NUP50-201ENST00000347635 H3BP45 60 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 TSPAN2O60636 221 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 EDN3P14138 238 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 FZD5Q13467 585 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 OR4A16Q8NH70 328 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 UHRF2Q96PU4 802 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 GPR132Q9UNW8 380 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 WDR1O75083 606 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 PDCD6O75340 191 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
NUP50-201ENST00000347635 ARG1P05089 322 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 CLN3Q13286 438 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 ZNF528Q3MIS6 628 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 TSPO2Q5TGU0 170 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 OR13G1Q8NGZ3 307 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 LPAR5Q9H1C0 372 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 ARV1Q9H2C2 271 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 HEXA-AS1Q9H8Q6 139 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 KCNMB2Q9Y691 235 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 DAOP14920 347 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 RAB5AP20339 215 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 NPBWR1P48145 328 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 GPM6AP51674 278 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 LTC4SQ16873 150 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 CPEB3Q8NE35 698 aaKnown RBP12.96□□□□□ -0.33
NUP50-201ENST00000347635 OR4F5Q8NH21 305 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
NUP50-201ENST00000347635 ZNF646O15015 1829 aaPredicted RBP12.96□□□□□ -0.34
NUP50-201ENST00000347635 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.34
NUP50-201ENST00000347635 MEOX1P50221 254 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 NCR3LG1Q68D85 454 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 LSRQ86X29 649 aaPredicted RBP12.96□□□□□ -0.34
NUP50-201ENST00000347635 RPUSD4Q96CM3 377 aaKnown RBP12.96□□□□□ -0.34
NUP50-201ENST00000347635 GNRHR2Q96P88 292 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 OPA3Q9H6K4 179 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 SERTAD4Q9NUC0 356 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 SIRPB1O00241 398 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 TERTO14746 1132 aaKnown RBP12.96□□□□□ -0.34
NUP50-201ENST00000347635 GPR37O15354 613 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 METTL15P1P0C7V9 234 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 OR5AS1Q8N127 324 aa12.96□□□□□ -0.34
NUP50-201ENST00000347635 HPSE2Q8WWQ2 592 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms