RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 CTLA4P16410 223 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 EFNB2P52799 333 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 TUSC5Q8IXB3 177 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 OR52L2PQ8NGH6 319 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 OR1S2Q8NGQ3 325 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PCGF1Q9BSM1 259 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PRR13Q9NZ81 148 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PPIAL4AQ9Y536 164 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 OGG1O15527 345 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 EPPINO95925 133 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF32P17041 273 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 RAB4AP20338 218 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 CA6P23280 308 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 DTYMKP23919 212 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF121P58317 390 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 MESTQ5EB52 335 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 THNSL2Q86YJ6 484 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 WDR31Q8NA23 367 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 BTF3L4Q96K17 158 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 BIN3Q9NQY0 253 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ST6GALNAC2Q9UJ37 374 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ANKRD20A5PA0PJZ0 165 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 NDUFA2O43678 99 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 NGFP01138 241 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 HLA-DOBP13765 273 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 RPS4XP62701 263 aaKnown RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 CXorf67Q86X51 503 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 KCNRGQ8N5I3 272 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 FADS6Q8N9I5 356 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM104Q8NE00 496 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 OR4D10Q8NGI6 311 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF764Q96H86 408 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 OR4C12Q96R67 309 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ARV1Q9H2C2 271 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM74BQ9NUR3 256 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 DVL1O14640 695 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 HOXA6P31267 233 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 DVL1P1P54792 670 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 PRSS12P56730 875 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TLE4Q04727 773 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 KLF9Q13886 244 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF266Q14584 549 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TIGITQ495A1 244 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 Q5BKY6 102 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM217Q8N7C4 229 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF501Q96CX3 271 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-202ENST00000346436 C10orf90Q96M02 699 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 MTFP1Q9UDX5 166 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 FAM87AP0C7U9 286 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 RPA2P15927 270 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 PEA15Q15121 130 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ACOT7LQ6ZUV0 252 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 LYG1Q8N1E2 194 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF596Q8TC21 504 aa9.6□□□□□ -0.87
CLCN6-202ENST00000346436 SIGLEC5O15389 551 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 IGF2P01344 180 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 AKR1C3P42330 323 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 SEZ6L2Q6UXD5 910 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 C15orf54Q8N8G6 183 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 ADGRG7Q96K78 797 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF230Q9UIE0 474 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-202ENST00000346436 DOCK4Q8N1I0 1966 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 THY1P04216 161 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 RHOBP62745 196 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 LRRTM1Q86UE6 522 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 SLC25A42Q86VD7 318 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 ANGPTL6Q8NI99 470 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 VSTM2LQ96N03 204 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 CHST6Q9GZX3 395 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 MS4A18H0YCH9 400 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 M0R1X1 148 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 NME2P1O60361 137 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 SULT1A3P0DMM9 295 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 SULT1A4P0DMN0 295 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 PSMB6P28072 239 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 TGIF1Q15583 401 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 USF2Q15853 346 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-202ENST00000346436 MS4A18Q3C1V0 323 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 TAF9BQ9HBM6 251 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 COA4Q9NYJ1 87 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 A0A0B4J293 547 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM200CA6NKL6 621 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-202ENST00000346436 NGFRP08138 427 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 ACAA2P42765 397 aaKnown RBP9.59□□□□□ -0.87
CLCN6-202ENST00000346436 GNG10P50151 68 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 DHODHQ02127 395 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 C3AR1Q16581 482 aa9.59□□□□□ -0.87
CLCN6-202ENST00000346436 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms