RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PPP1CBP62140 327 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RBMXL3Q8N7X1 1067 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PDCD10Q9BUL8 212 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 C1QTNF6Q9BXI9 259 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR2J1Q9GZK6 312 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ATMQ13315 3056 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5B21A6NL26 309 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 EIF2S3P41091 472 aaKnown RBP12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ERVS71-1P61550 626 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GNG3P63215 75 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IKZF1Q13422 519 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OPCMLQ14982 345 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SURF2Q15527 256 aaPredicted RBP12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CLEC18BQ6UXF7 455 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LUZP4Q9P127 313 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 RFPL4AA6NLU0 287 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 RFPL4AL1F8VTS6 287 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CBR1P16152 277 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 PMELP40967 661 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SUPT4H1P63272 117 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SLC9A3R2Q15599 337 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 NHLRC3Q5JS37 347 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 C1orf162Q8NEQ5 155 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 STARD4Q96DR4 205 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 BOD1Q96IK1 185 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 LHX6Q9UPM6 363 aa12.08□□□□□ -0.48
CDK5RAP1-202ENST00000346416 MBD3L4A6NDZ8 208 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 MBD3L3A6NE82 208 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 MBD3L5A6NJ08 208 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 AGFG2O95081 481 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SFT2D2O95562 160 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 PGAM2P15259 253 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 UCP2P55851 309 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 PLEKHN1Q494U1 663 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 Q6ZPA2 131 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 MBD3L2Q8NHZ7 208 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CITED4Q96RK1 184 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 OPN3Q9H1Y3 402 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 LIME1Q9H400 295 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SHANK1Q9Y566 2161 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 WDR1O75083 606 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 KNG1P01042 644 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CGAP01215 116 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 S100A11P31949 105 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ECI1P42126 302 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 FGL1Q08830 312 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 FOXC1Q12948 553 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 IGFBP7Q16270 282 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SLC22A25Q6T423 547 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CXorf67Q86X51 503 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 OR1J1Q8NGS3 322 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 SLC25A40Q8TBP6 338 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 EXTL1Q92935 676 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 OR51I2Q9H344 312 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ZNF286AQ9HBT8 521 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 C14orf166Q9Y224 244 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP1-202ENST00000346416 PRSS44E7EML9 344 aa12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 ZNF205O95201 554 aa12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 RPS2P15880 293 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 DUSP1P28562 367 aa12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 CALCRP30988 508 aa12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 IL24Q13007 206 aa12.06□□□□□ -0.48
CDK5RAP1-202ENST00000346416 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms