RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DCAF12L2Q5VW00 463 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 ZNF573Q86YE8 665 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 SAMD12Q8N8I0 201 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 SPERTQ8NA61 448 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 SCCPDHQ8NBX0 429 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 ACOT12Q8WYK0 555 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 FAM46BQ96A09 425 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
TPM4-202ENST00000344824 NXF2Q9GZY0 626 aaKnown RBP11.54□□□□□ -0.56
TPM4-202ENST00000344824 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 FN3KRPQ9HA64 309 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 ABRACLQ9P1F3 81 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 MXRA5Q9NR99 2828 aa11.54□□□□□ -0.56
TPM4-202ENST00000344824 A0A075B6Q4 140 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 PPIAL4EA0A075B759 164 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 TMEM272A0A1B0GTI8 110 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 A0A1B0GWJ7 208 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 A0A1W2PP11 408 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 TMEM210A6NLX4 147 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 PPIAL4DF5H284 164 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 J3QT63 122 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CDIPTO14735 213 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CRTAPO75718 401 aaPredicted RBP11.53□□□□□ -0.56
TPM4-202ENST00000344824 RHBDL1O75783 438 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 HTR3BO95264 441 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 PPIAL4FP0DN26 164 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CD37P11049 281 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CD80P33681 288 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 SEC61A1P61619 476 aaKnown RBP11.53□□□□□ -0.56
TPM4-202ENST00000344824 HOXA4Q00056 320 aaPredicted RBP11.53□□□□□ -0.56
TPM4-202ENST00000344824 RSU1Q15404 277 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 TMEM155Q4W5P6 130 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 ESCO2Q56NI9 601 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
TPM4-202ENST00000344824 ZNF826PQ6ZT77 177 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 LAX1Q8IWV1 398 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CELF2-AS1Q8N7Q2 184 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 CEP19Q96LK0 163 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 ZNF488Q96MN9 340 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 METTL9Q9H1A3 318 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 MMP27Q9H306 513 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 BANF2Q9H503 90 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 PATZ1Q9HBE1 687 aaKnown RBP11.53□□□□□ -0.56
TPM4-202ENST00000344824 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 PPIAL4AQ9Y536 164 aa11.53□□□□□ -0.56
TPM4-202ENST00000344824 IGKV1-12A0A0C4DH73 117 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 A0A0G2JMP0 313 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 A0A0X1KG70 313 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 BPNT1O95861 308 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 MPIG6BO95866 241 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 CYB5AP00167 134 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 IGKV1D-12P01611 117 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 BCL3P20749 454 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 CFPP27918 469 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 S100A5P33763 92 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 PMELP40967 661 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 GATA4P43694 442 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 EFNB2P52799 333 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 SNU13P55769 128 aaKnown RBP11.52□□□□□ -0.56
TPM4-202ENST00000344824 LRRC28Q86X40 367 aaPredicted RBP11.52□□□□□ -0.56
TPM4-202ENST00000344824 MKXQ8IYA7 352 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 DTX3Q8N9I9 347 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 OR4M2Q8NGB6 313 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 TBC1D15Q8TC07 691 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 AQP3Q92482 292 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 SPATA2Q9UM82 520 aa11.52□□□□□ -0.56
TPM4-202ENST00000344824 TRAPPC2LH3BP13 241 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
TPM4-202ENST00000344824 FOXH1O75593 365 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 CSTBP04080 98 aaKnown RBP11.52□□□□□ -0.57
TPM4-202ENST00000344824 EIF4EP06730 217 aaKnown RBP11.52□□□□□ -0.57
TPM4-202ENST00000344824 VSIG8P0DPA2 414 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 NPBWR2P48146 333 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 SFRP4Q6FHJ7 346 aaPredicted RBP11.52□□□□□ -0.57
TPM4-202ENST00000344824 TMEM104Q8NE00 496 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 ERGIC1Q969X5 290 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 C1orf147Q96MC9 270 aaPredicted RBP11.52□□□□□ -0.57
TPM4-202ENST00000344824 PKIBQ9C010 78 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 PEX16Q9Y5Y5 336 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 ETV7Q9Y603 341 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 A3GALT2U3KPV4 340 aa11.52□□□□□ -0.57
TPM4-202ENST00000344824 LOC105371242A0A075B767 164 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 AKR7A2O43488 359 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 KDM4BO94953 1096 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 SFTPBP07988 381 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 UBBP0CG47 229 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 ELK1P19419 428 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
TPM4-202ENST00000344824 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
TPM4-202ENST00000344824 IL24Q13007 206 aa11.51□□□□□ -0.57
TPM4-202ENST00000344824 UNC119Q13432 240 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms