RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ABCB10Q9NRK6 738 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 AASSQ9UDR5 926 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 GLS2Q9UI32 602 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 PITPNC1Q9UKF7 332 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 GMPPBQ9Y5P6 360 aa10.08□□□□□ -0.8
SGCA-202ENST00000344627 SLC16A6O15403 523 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 TSPAN15O95858 294 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 IGHA1P01876 353 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 PEX2P28328 305 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 NPBWR2P48146 333 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 ALDH3A2P51648 485 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 EFNB2P52799 333 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 SNRPGP62308 76 aaKnown RBP10.07□□□□□ -0.8
SGCA-202ENST00000344627 SCN1BQ07699 218 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 GRK1Q15835 563 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 LHFPL2Q6ZUX7 228 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 LHFPL4Q7Z7J7 247 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 TRAPPC6BQ86SZ2 158 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 LHFPL3Q86UP9 236 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 Q8IYB0 196 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 OR8H2Q8N162 312 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 FAM58AQ8N1B3 248 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 CBR4Q8N4T8 237 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 OR4S1Q8NGB4 309 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 C4orf36Q96KX1 117 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 NEK6Q9HC98 313 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 RBFOX1Q9NWB1 397 aaKnown RBP10.07□□□□□ -0.8
SGCA-202ENST00000344627 FRRS1LQ9P0K9 344 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 IL36RNQ9UBH0 155 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 HHLA2Q9UM44 414 aa10.07□□□□□ -0.8
SGCA-202ENST00000344627 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 TMEM82A0PJX8 343 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 VGLL3A8MV65 326 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 ZNF737O75373 536 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 RBP4P02753 201 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 AZGP1P25311 298 aaKnown RBP10.06□□□□□ -0.8
SGCA-202ENST00000344627 RAB13P51153 203 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 ISL1P61371 349 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 SSX2Q16385 188 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 C11orf44Q8N8P7 122 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 PPP1R35Q8TAP8 253 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 FOXRED1Q96CU9 486 aaPredicted RBP10.06□□□□□ -0.8
SGCA-202ENST00000344627 AJUBAQ96IF1 538 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 OPALINQ96PE5 141 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 SPACA5Q96QH8 159 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 MYCBPQ99417 103 aaPredicted RBP10.06□□□□□ -0.8
SGCA-202ENST00000344627 GSTK1Q9Y2Q3 226 aa10.06□□□□□ -0.8
SGCA-202ENST00000344627 TGP01266 2768 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 C17orf98A8MV24 154 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 H3BNX3 289 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 SIRPB1O00241 398 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 SH2D1BO14796 132 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 ALDOBP05062 364 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 ISG15P05161 165 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 DLX6P56179 175 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 NANOS3P60323 173 aaKnown RBP10.05□□□□□ -0.8
SGCA-202ENST00000344627 ACTA2P62736 377 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 ACTG2P63267 376 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
SGCA-202ENST00000344627 PDZK1IP1Q13113 114 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 ALKBH1Q13686 389 aaKnown RBP10.05□□□□□ -0.8
SGCA-202ENST00000344627 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 OR5D18Q8NGL1 313 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 OR10AC1Q8NH08 325 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 NDNFQ8TB73 568 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 RPS4Y2Q8TD47 263 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 SPSB1Q96BD6 273 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 LGALS12Q96DT0 336 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 PELI1Q96FA3 418 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 Q96MT0 163 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 MBOAT4Q96T53 435 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 C9orf16Q9BUW7 83 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 ALG8Q9BVK2 526 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 AMBNQ9NP70 447 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 TBL2Q9Y4P3 447 aaKnown RBP10.05□□□□□ -0.8
SGCA-202ENST00000344627 PCDHGB5Q9Y5G0 923 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 HILPDAQ9Y5L2 63 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 NOTCH1P46531 2555 aa10.05□□□□□ -0.8
SGCA-202ENST00000344627 TRBV2A0A0J9YWF9 115 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 J3QRE1 110 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 MGST3O14880 152 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 BAG2O95816 211 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 HCKP08631 526 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 CCR9P51686 369 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 ZNF91Q05481 1191 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 GALEQ14376 348 aa10.04□□□□□ -0.8
SGCA-202ENST00000344627 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
SGCA-202ENST00000344627 SLC25A30Q5SVS4 291 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms