RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
CLCN1-201ENST00000343257 CMTM1Q8IZ96 169 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SLC2A9Q9NRM0 540 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 FBLN5Q9UBX5 448 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SHISA7A6NL88 538 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 OR4A8P0C604 315 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 DAP3P51398 398 aaKnown RBP12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SLC22A25Q6T423 547 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 LGI3Q8N145 548 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 WWTR1Q9GZV5 400 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 EYSQ5T1H1 3165 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 FRG2CA6NGY1 282 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SEMA4FO95754 770 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 IFI6P09912 130 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 CTSEP14091 401 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 MYOGP15173 224 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 LMO1P25800 156 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 ERVS71-1P61550 626 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 GABREP78334 506 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 ZNF154Q13106 437 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 P2RY6Q15077 328 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 LANCL3Q6ZV70 420 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 FBXL14Q8N1E6 418 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 BOD1Q96IK1 185 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 NUDT16L1Q9BRJ7 211 aaKnown RBP12.97□□□□□ -0.33
CLCN1-201ENST00000343257 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 TP53TG5Q9Y2B4 290 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 WDFY3Q8IZQ1 3526 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 A0A1W2PNR3 127 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 A6NNC1 897 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 GFERP55789 205 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 RNF4P78317 190 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 COL10A1Q03692 680 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 TNFRSF9Q07011 255 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 NSDHLQ15738 373 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 TP53RKQ96S44 253 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 GLRX2Q9NS18 164 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 GPR173Q9NS66 373 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 KIAA1456Q9P272 454 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 ALG1L2C9J202 215 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 EFNA3P52797 238 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 VAMP2P63027 116 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 SPIN3Q5JUX0 258 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 C1orf189Q5VU69 101 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 ZNF721Q8TF20 911 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM37Q8WXS4 190 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 UCK1Q9HA47 277 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 SIRT7Q9NRC8 400 aa12.96□□□□□ -0.33
CLCN1-201ENST00000343257 DDAH2O95865 285 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 PNLIPP16233 465 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF43P17038 809 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 JOSD1Q15040 202 aaPredicted RBP12.95□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF665Q9H7R5 613 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 IL17BQ9UHF5 180 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 TRIOO75962 3097 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 ARHGAP21Q5T5U3 1957 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 A0A087WWC5 75 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 XKRY2A2RUG3 117 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 PRSS8Q16651 343 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 THNSL2Q86YJ6 484 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 FAM89BQ8N5H3 189 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 CLDND2Q8NHS1 167 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 LAMP3Q9UQV4 416 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 PIGLQ9Y2B2 252 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 SERPINE3A8MV23 424 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 CLDN34H7C241 214 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 TNFP01375 233 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 THEGLP0DJG4 465 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
CLCN1-201ENST00000343257 CLN3Q13286 438 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 LYZL4Q96KX0 146 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 CHST11Q9NPF2 352 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 SERINC1Q9NRX5 453 aa12.95□□□□□ -0.34
CLCN1-201ENST00000343257 HSPA12AO43301 675 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 IL18BPO95998 194 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 IGHMP01871 453 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
CLCN1-201ENST00000343257 FOXO1Q12778 655 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 FOXF1Q12946 379 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 ADIRFQ15847 76 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 NAT6Q93015 286 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 NKX2-4Q9H2Z4 354 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 A0A1W2PR80 420 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 TSPAN2O60636 221 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 MRPS34P82930 218 aaKnown RBP12.94□□□□□ -0.34
CLCN1-201ENST00000343257 ZNF266Q14584 549 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 SLC10A1Q14973 349 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 CRIP3Q6Q6R5 217 aa12.94□□□□□ -0.34
CLCN1-201ENST00000343257 MSI2Q96DH6 328 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms