RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 KIR2DS1Q14954 304 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 GRK1Q15835 563 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 HLA-DRB5Q30154 266 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 DEFB136Q30KP8 78 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 C5orf56Q8N8D9 126 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 CEP19Q96LK0 163 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 NSMCE2Q96MF7 247 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 CHST6Q9GZX3 395 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF286AQ9HBT8 521 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 V9GYS6 101 aa13.26□□□□□ -0.29
TRA2B-202ENST00000342294 PRR32B1ATL7 298 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 ARPC2O15144 300 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 HAND1O96004 215 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 IGHG2P01859 326 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 HSD17B1P14061 328 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 CDK2P24941 298 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 MNDAP41218 407 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
TRA2B-202ENST00000342294 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 CD300LDQ6UXZ3 194 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 Q6ZSR3 168 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 STPG2Q8N412 459 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 OR14K1Q8NGZ2 314 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 OR8U1Q8NH10 309 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 LAMP5Q9UJQ1 280 aa13.25□□□□□ -0.29
TRA2B-202ENST00000342294 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRA2B-202ENST00000342294 A0A1B0GTI1 187 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 PRR23D1E9PI22 279 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 MGST3O14880 152 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 PRODHO43272 600 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 FGF16O43320 207 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 SRSF10O75494 262 aaKnown RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 RPLP1P05386 114 aaKnown RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 PRR23D2P0DMB1 279 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 GABRR1P24046 479 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 MAGEA2P43356 314 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 P2RX3P56373 397 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 ROM1Q03395 351 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF91Q05481 1191 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 MICAQ29983 383 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 UTF1Q5T230 341 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 SLX4IPQ5VYV7 408 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 TEX38Q6PEX7 206 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 MEPCEQ7L2J0 689 aaKnown RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 TRAPPC6BQ86SZ2 158 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 CORO2AQ92828 525 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
TRA2B-202ENST00000342294 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
TRA2B-202ENST00000342294 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 A0A087X0M5 115 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 A0A1B0GX30 115 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 A6NIN4 97 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 CCDC22O60826 627 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF254O75437 659 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 SLC2A5P22732 501 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 OR3A1P47881 315 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 LCNL1Q6ZST4 164 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF679Q8IYX0 411 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 RNF152Q8N8N0 203 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
TRA2B-202ENST00000342294 TEX47Q8TBZ9 253 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 SLAMF9Q96A28 289 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 NIPSNAP1Q9BPW8 284 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 MROQ9BYG7 248 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 GAL3ST2Q9H3Q3 398 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 TAS2R3Q9NYW6 316 aa13.23□□□□□ -0.29
TRA2B-202ENST00000342294 DHRS7CA6NNS2 312 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 TOR1AO14656 332 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 E2F6O75461 281 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 ESRRGP62508 458 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 FHL3Q13643 280 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF829Q3KNS6 432 aaPredicted RBP13.22□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF260Q3ZCT1 412 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 SLC35D3Q5M8T2 416 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 OVCH2Q7RTZ1 564 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 CPOQ8IVL8 374 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 ELMOD2Q8IZ81 293 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 BBS1Q8NFJ9 593 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 SLC7A11Q9UPY5 501 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 U3KQV3 271 aa13.22□□□□□ -0.29
TRA2B-202ENST00000342294 TRGV10A0A0A0MS01 117 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 FAM230AA0A1W2PPH8 454 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 CCRL2O00421 344 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 DUSP1P28562 367 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 PRRX1P54821 245 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 CBX1P83916 185 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 ZNF146Q15072 292 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 PNLIPRP3Q17RR3 467 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 SLC25A26Q70HW3 274 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms