RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SULT1A2P50226 295 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 TFF2Q03403 129 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 CLN3Q13286 438 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 C9orf40Q8IXQ3 194 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 OR13G1Q8NGZ3 307 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 OR6X1Q8NH79 312 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 POLDIP2Q9Y2S7 368 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 CD46P15529 392 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 ARL3P36405 182 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 DSCR4P56555 118 aaPredicted RBP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 PINX1Q96BK5 328 aaKnown RBP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 CACNG5Q9UF02 275 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 IGHV1OR21-1A0A087WYE8 117 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 A0A087X0M5 115 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 A0A1B0GX30 115 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 CBR3O75828 277 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 KIR2DL1P43626 348 aaPredicted RBP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF154Q13106 437 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 OR8G1Q15617 311 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 TMEM241Q24JQ0 296 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 SPATA46Q5T0L3 261 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 H0Y8G0 127 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 FAM157BP0CG42 384 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 ID4P47928 161 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 THOC3Q96J01 351 aaKnown RBP13.07□□□□□ -0.32
RRP1B-201ENST00000340648 CCDC74BQ96LY2 380 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 PLGLAQ15195 96 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 PHYHD1Q5SRE7 291 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
RRP1B-201ENST00000340648 PNLIPP16233 465 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 RPS11P62280 158 aaKnown RBP eCLIP13.07□□□□□ -0.32
RRP1B-201ENST00000340648 RAB40CQ96S21 281 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 IGKV1D-42A0A075B6H8 117 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 LPAR6P43657 344 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 PPP1CBP62140 327 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 MPV17LQ2QL34 196 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 SIGLECL1Q8N7X8 197 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 KCNE4Q8WWG9 221 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 SLC25A22Q9H936 323 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 GPR132Q9UNW8 380 aa13.07□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF737O75373 536 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
RRP1B-201ENST00000340648 SPINK2P20155 84 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 THBS3P49746 956 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 GAS1P54826 345 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 NHLH2Q02577 135 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 CEBPEQ15744 281 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 OR10C1Q96KK4 312 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 PACRGQ96M98 296 aaPredicted RBP13.06□□□□□ -0.32
RRP1B-201ENST00000340648 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 MPPED1O15442 326 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 CHST1O43916 411 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 SOX15O60248 233 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 PIAS2O75928 621 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 BMP5P22003 454 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 FOXL2P58012 376 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 SLC38A11Q08AI6 406 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 AQP3Q92482 292 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 NPTNQ9Y639 398 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 CER1O95813 267 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 ROM1Q03395 351 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 VAX1Q5SQQ9 334 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 VASH2Q86V25 355 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF586Q9NXT0 402 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 DVL1O14640 695 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 CHRNA7P36544 502 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 IQCJQ1A5X6 159 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 TECTBQ96PL2 329 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
RRP1B-201ENST00000340648 SIP14410 1827 aa13.06□□□□□ -0.32
RRP1B-201ENST00000340648 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
RRP1B-201ENST00000340648 CTSBP07858 339 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 KRTDAPP60985 99 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 TMEM74BQ9NUR3 256 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 YBX2Q9Y2T7 364 aaKnown RBP13.05□□□□□ -0.32
RRP1B-201ENST00000340648 STARD10Q9Y365 291 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 PSME4Q14997 1843 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 IGLV1-36A0A0B4J1U3 117 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 GALNSP34059 522 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 ARR3P36575 388 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 HYAL1Q12794 435 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 WIPI1Q5MNZ9 446 aaPredicted RBP13.05□□□□□ -0.32
RRP1B-201ENST00000340648 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms