RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KISS1Q15726 138 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 RNLSQ5VYX0 342 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 IZUMO2Q6UXV1 221 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 C1orf122Q6ZSJ8 110 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 Q8IYB0 196 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 STX19Q8N4C7 294 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 OR5D18Q8NGL1 313 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 TNFRSF14Q92956 283 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 EMG1Q92979 244 aaKnown RBP12.63□□□□□ -0.39
VAPA-201ENST00000340541 LHX4Q969G2 390 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 TAS2R4Q9NYW5 299 aa12.63□□□□□ -0.39
VAPA-201ENST00000340541 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 H0YHG0 523 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 M0R1W7 72 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 WIPF1O43516 503 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 OCM2P0CE71 109 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 OCMP0CE72 109 aaPredicted RBP12.62□□□□□ -0.39
VAPA-201ENST00000340541 CALCBP10092 127 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 CAPZA1P52907 286 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 WNT4P56705 351 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 PRB3Q04118 309 aaPredicted RBP12.62□□□□□ -0.39
VAPA-201ENST00000340541 ZNF146Q15072 292 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 DEFB112Q30KQ8 113 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
VAPA-201ENST00000340541 SAXO1Q8IYX7 474 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 FAM58AQ8N1B3 248 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 TMEM106AQ96A25 262 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 CDCA4Q9BXL8 241 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 UNKLQ9H9P5 680 aaKnown RBP12.62□□□□□ -0.39
VAPA-201ENST00000340541 HMG20AQ9NP66 347 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 SIRT7Q9NRC8 400 aa12.62□□□□□ -0.39
VAPA-201ENST00000340541 PKD1L1Q8TDX9 2849 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 DNAJC9-AS1A6NH13 148 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 PTGES3LE9PB15 166 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 RNASEK-C17orf49H0YIS7 233 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 MYL12BO14950 172 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 HAND1O96004 215 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 CYB5AP00167 134 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 CD2P06729 351 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 CHRM2P08172 466 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 HCKP08631 526 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 RAB3AP20336 220 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 DUSP1P28562 367 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 SLC35A2P78381 396 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 YIF1BQ5BJH7 314 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 C17orf107Q6ZR85 190 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 PDZD9Q8IXQ8 264 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 C11orf42Q8N5U0 333 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 ZSCAN4Q8NAM6 433 aaPredicted RBP12.61□□□□□ -0.39
VAPA-201ENST00000340541 OR52N4Q8NGI2 321 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 VCX3BQ9H321 246 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 NEK6Q9HC98 313 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 LSM2Q9Y333 95 aaKnown RBP12.61□□□□□ -0.39
VAPA-201ENST00000340541 PCDHGB5Q9Y5G0 923 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 MEGF8Q7Z7M0 2845 aa12.61□□□□□ -0.39
VAPA-201ENST00000340541 GABRPO00591 440 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 PSPNO60542 156 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 CD1AP06126 327 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 RNASE1P07998 156 aaKnown RBP12.6□□□□□ -0.39
VAPA-201ENST00000340541 PRKACAP17612 351 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
VAPA-201ENST00000340541 TAS2R43P59537 309 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
VAPA-201ENST00000340541 BAMBIQ13145 260 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 ZNF273Q14593 569 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 IRF3Q14653 427 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 Q499Y3 187 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 SPIN3Q5JUX0 258 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 HCP5Q6MZN7 132 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 ASCC1Q8N9N2 400 aaKnown RBP12.6□□□□□ -0.39
VAPA-201ENST00000340541 OR4M1Q8NGD0 313 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 SNX22Q96L94 193 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
VAPA-201ENST00000340541 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 ERGIC3Q9Y282 383 aa12.6□□□□□ -0.39
VAPA-201ENST00000340541 TRBV5-7A0A0A0MS05 114 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 PNMA8CA0A1B0GUJ8 204 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 GPX5O75715 221 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 ALDOBP05062 364 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 TMEM225BP0DP42 221 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 CELP19835 753 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 SNU13P55769 128 aaKnown RBP12.59□□□□□ -0.39
VAPA-201ENST00000340541 DLX6P56179 175 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 BDH1Q02338 343 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 ACSM1Q08AH1 577 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 KLRD1Q13241 179 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms