RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
RET-201ENST00000340058 ZNF724A8MTY0 619 aa12.87□□□□□ -0.35
RET-201ENST00000340058 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
RET-201ENST00000340058 IGF2P01344 180 aa12.87□□□□□ -0.35
RET-201ENST00000340058 PGA4P0DJD7 388 aa12.87□□□□□ -0.35
RET-201ENST00000340058 PGA3P0DJD8 388 aa12.87□□□□□ -0.35
RET-201ENST00000340058 HES1Q14469 280 aa12.87□□□□□ -0.35
RET-201ENST00000340058 Q5BKY6 102 aa12.87□□□□□ -0.35
RET-201ENST00000340058 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
RET-201ENST00000340058 MRGPRDQ8TDS7 321 aa12.87□□□□□ -0.35
RET-201ENST00000340058 ZNF837Q96EG3 531 aaPredicted RBP12.87□□□□□ -0.35
RET-201ENST00000340058 CMTM3Q96MX0 182 aa12.87□□□□□ -0.35
RET-201ENST00000340058 AK3Q9UIJ7 227 aa12.87□□□□□ -0.35
RET-201ENST00000340058 KLK13Q9UKR3 277 aa12.87□□□□□ -0.35
RET-201ENST00000340058 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
RET-201ENST00000340058 CISD2Q8N5K1 135 aaKnown RBP12.87□□□□□ -0.35
RET-201ENST00000340058 SCMH1Q96GD3 660 aa12.87□□□□□ -0.35
RET-201ENST00000340058 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
RET-201ENST00000340058 CTXN2P0C2S0 81 aa12.86□□□□□ -0.35
RET-201ENST00000340058 H2AFB1P0C5Y9 115 aa12.86□□□□□ -0.35
RET-201ENST00000340058 SP9P0CG40 484 aa12.86□□□□□ -0.35
RET-201ENST00000340058 KITLGP21583 273 aa12.86□□□□□ -0.35
RET-201ENST00000340058 RPL19P84098 196 aaKnown RBP12.86□□□□□ -0.35
RET-201ENST00000340058 LGALSLQ3ZCW2 172 aaPredicted RBP12.86□□□□□ -0.35
RET-201ENST00000340058 STPG1Q5TH74 334 aa12.86□□□□□ -0.35
RET-201ENST00000340058 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
RET-201ENST00000340058 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
RET-201ENST00000340058 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
RET-201ENST00000340058 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
RET-201ENST00000340058 ZNF250P15622 560 aa12.86□□□□□ -0.35
RET-201ENST00000340058 CHATP28329 748 aa12.86□□□□□ -0.35
RET-201ENST00000340058 CEACAM6P40199 344 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OR3A1P47881 315 aa12.86□□□□□ -0.35
RET-201ENST00000340058 SNAI3Q3KNW1 292 aa12.86□□□□□ -0.35
RET-201ENST00000340058 GGNBP1Q5YKI7 109 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OR2W3Q7Z3T1 314 aa12.86□□□□□ -0.35
RET-201ENST00000340058 ZBTB44Q8NCP5 570 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OPN4Q9UHM6 478 aa12.86□□□□□ -0.35
RET-201ENST00000340058 ANXA10Q9UJ72 324 aa12.86□□□□□ -0.35
RET-201ENST00000340058 FAM96BQ9Y3D0 163 aa12.86□□□□□ -0.35
RET-201ENST00000340058 LINC01387J3KSC0 135 aa12.86□□□□□ -0.35
RET-201ENST00000340058 K7ESF4 209 aa12.86□□□□□ -0.35
RET-201ENST00000340058 IGLV3-19P01714 112 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OPN1MWP04001 364 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OPN1MW2P0DN77 364 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OPN1MW3P0DN78 364 aa12.86□□□□□ -0.35
RET-201ENST00000340058 FPR2P25090 351 aa12.86□□□□□ -0.35
RET-201ENST00000340058 ECI1P42126 302 aa12.86□□□□□ -0.35
RET-201ENST00000340058 OR2J1Q9GZK6 312 aa12.86□□□□□ -0.35
RET-201ENST00000340058 THADAQ6YHU6 1953 aa12.86□□□□□ -0.35
RET-201ENST00000340058 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
RET-201ENST00000340058 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
RET-201ENST00000340058 BCL3P20749 454 aa12.86□□□□□ -0.35
RET-201ENST00000340058 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
RET-201ENST00000340058 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
RET-201ENST00000340058 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
RET-201ENST00000340058 TGIF2Q9GZN2 237 aa12.86□□□□□ -0.35
RET-201ENST00000340058 FAM90A27PA6NNH2 459 aa12.85□□□□□ -0.35
RET-201ENST00000340058 B4E171 279 aa12.85□□□□□ -0.35
RET-201ENST00000340058 AQP7O14520 342 aa12.85□□□□□ -0.35
RET-201ENST00000340058 HEXAP06865 529 aa12.85□□□□□ -0.35
RET-201ENST00000340058 SULT1A3P0DMM9 295 aa12.85□□□□□ -0.35
RET-201ENST00000340058 SULT1A4P0DMN0 295 aa12.85□□□□□ -0.35
RET-201ENST00000340058 TSPAN7P41732 249 aa12.85□□□□□ -0.35
RET-201ENST00000340058 GNG10P50151 68 aa12.85□□□□□ -0.35
RET-201ENST00000340058 POLR2GP62487 172 aaKnown RBP eCLIP12.85□□□□□ -0.35
RET-201ENST00000340058 PPP1R32Q7Z5V6 425 aa12.85□□□□□ -0.35
RET-201ENST00000340058 C2CD4CQ8TF44 421 aa12.85□□□□□ -0.35
RET-201ENST00000340058 CCL17Q92583 94 aa12.85□□□□□ -0.35
RET-201ENST00000340058 PRSS50Q9UI38 385 aa12.85□□□□□ -0.35
RET-201ENST00000340058 PSG11Q9UQ72 335 aa12.85□□□□□ -0.35
RET-201ENST00000340058 H7C1Q1 480 aa12.85□□□□□ -0.35
RET-201ENST00000340058 TERTO14746 1132 aaKnown RBP12.85□□□□□ -0.35
RET-201ENST00000340058 ADAM20O43506 726 aa12.85□□□□□ -0.35
RET-201ENST00000340058 JTBO76095 146 aa12.85□□□□□ -0.35
RET-201ENST00000340058 SSBP1Q04837 148 aaKnown RBP12.85□□□□□ -0.35
RET-201ENST00000340058 PRRX2Q99811 253 aa12.85□□□□□ -0.35
RET-201ENST00000340058 SF3B5Q9BWJ5 86 aaKnown RBP12.85□□□□□ -0.35
RET-201ENST00000340058 GPR27Q9NS67 375 aa12.85□□□□□ -0.35
RET-201ENST00000340058 LRRC30A6NM36 301 aa12.85□□□□□ -0.35
RET-201ENST00000340058 C21orf140B9A014 251 aa12.85□□□□□ -0.35
RET-201ENST00000340058 E5RGE8 158 aa12.85□□□□□ -0.35
RET-201ENST00000340058 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
RET-201ENST00000340058 SFT2D2O95562 160 aa12.85□□□□□ -0.35
RET-201ENST00000340058 GP1BAP07359 652 aa12.85□□□□□ -0.35
RET-201ENST00000340058 RAG2P55895 527 aa12.85□□□□□ -0.35
RET-201ENST00000340058 HIST2H3PS2Q5TEC6 136 aa12.85□□□□□ -0.35
RET-201ENST00000340058 MDP1Q86V88 176 aa12.85□□□□□ -0.35
RET-201ENST00000340058 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
RET-201ENST00000340058 OIT3Q8WWZ8 545 aa12.85□□□□□ -0.35
RET-201ENST00000340058 GALMQ96C23 342 aa12.85□□□□□ -0.35
RET-201ENST00000340058 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
RET-201ENST00000340058 RIMS4Q9H426 269 aaPredicted RBP12.85□□□□□ -0.35
RET-201ENST00000340058 NSG2Q9Y328 171 aa12.85□□□□□ -0.35
RET-201ENST00000340058 ROM1Q03395 351 aa12.84□□□□□ -0.35
RET-201ENST00000340058 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
RET-201ENST00000340058 ZDHHC22Q8N966 263 aa12.84□□□□□ -0.35
RET-201ENST00000340058 LRRC29Q8WV35 223 aa12.84□□□□□ -0.35
RET-201ENST00000340058 PINX1Q96BK5 328 aaKnown RBP12.84□□□□□ -0.35
RET-201ENST00000340058 EGLN1Q9GZT9 426 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms