RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 BET1LQ9NYM9 111 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 LOC102723971A0A1B0GUV8 181 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 OR5B21A6NL26 309 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 B4DEV8 164 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 SERF1AO75920 110 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ABHD16AO95870 558 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ONECUT2O95948 504 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CD1AP06126 327 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 POU2F2P09086 479 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 STAG3L3P0CL85 134 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 PPIAL4GP0DN37 164 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM225BP0DP42 221 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF43P17038 809 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 RBMXP38159 391 aaKnown RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 SLAQ13239 276 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 FAM166AQ6J272 317 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 NUP43Q8NFH3 380 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 OR52M1Q8NGK5 317 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 KCNE4Q8WWG9 221 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 PSMF1Q92530 271 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 WBP2Q969T9 261 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CNRIP1Q96F85 164 aaPredicted RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 LMF2Q9BU23 707 aaKnown RBP8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 COL4A3Q01955 1670 aa8.45□□□□□ -1.06
PTCHD4-201ENST00000339488 CEBPZOSA8MTT3 80 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 DIRC3C9JPN6 131 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 PROB1E7EW31 1015 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 LYPD3O95274 346 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 H2BFMP0C1H6 154 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 OAZ1P54368 228 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 MRPS34P82930 218 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 CNN3Q15417 329 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 KIAA0895LQ68EN5 471 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 COX15Q7KZN9 410 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 MARCH3Q86UD3 253 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 RCBTB1Q8NDN9 531 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ARRDC3Q96B67 414 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM204Q9BSN7 226 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 EFCAB11Q9BUY7 163 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ST6GALNAC5Q9BVH7 336 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 VDAC3Q9Y277 283 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 TRAPPC1Q9Y5R8 145 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 NSG1A0A0A6YYJ2 146 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 A0A0U1RQK1 487 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ERI3O43414 337 aaKnown RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 BMP5P22003 454 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 TSPOP30536 169 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 NTSR1P30989 418 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ADMP35318 185 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF93P35789 620 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 CTRLP40313 264 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 RBPJQ06330 500 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 UNC119Q13432 240 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 ACOT6Q3I5F7 207 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 LINC01590Q5TEZ4 76 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 OR2M3Q8NG83 312 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 WFDC5Q8TCV5 224 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM171Q8WVE6 324 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 COL4A4P53420 1690 aaPredicted RBP8.44□□□□□ -1.06
PTCHD4-201ENST00000339488 SPAARA0A1B0GVQ0 90 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 GJE1A6NN92 205 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 OR7C2O60412 319 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 CST7O76096 145 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 UCP1P25874 307 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RAB9AP51151 201 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 METAP1P53582 386 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 MFGE8Q08431 387 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 GGTLC2Q14390 218 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 PLEKHS1Q5SXH7 462 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 FAM78BQ5VT40 261 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 MRGPRGQ86SM5 289 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 NRSN1Q8IZ57 195 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 GLYATL1Q969I3 302 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 C16orf70Q9BSU1 422 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC46A2Q9BY10 475 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF586Q9NXT0 402 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RBPJLQ9UBG7 517 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 ERRFI1Q9UJM3 462 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 KIAA1549Q9HCM3 1950 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 FAM230AA0A1W2PPH8 454 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 SLC31A1O15431 190 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 HLA-HP01893 362 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 IL3RAP26951 378 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 EPHA8P29322 1005 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RABIFP47224 123 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 TRA2BP62995 288 aaKnown RBP8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RELBQ01201 579 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 WDR74Q6RFH5 385 aaPredicted RBP8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF595Q8IYB9 648 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 ZNF519Q8TB69 540 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RLN3Q8WXF3 142 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 C4orf45Q96LM5 186 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 ABHD6Q9BV23 337 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 RTN4RQ9BZR6 473 aa8.43□□□□□ -1.06
PTCHD4-201ENST00000339488 PNO1Q9NRX1 252 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms