RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 OR5AP2Q8NGF4 316 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 GPR137Q96N19 417 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 RANBP3Q9H6Z4 567 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 HEXA-AS1Q9H8Q6 139 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 C9orf170A2RU37 121 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 HS3ST1O14792 307 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 RGS13O14921 159 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 MPC2O95563 127 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CFDP00746 253 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 KNG1P01042 644 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 IGKV3-15P01624 115 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CXCL2P19875 107 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CALCRP30988 508 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF81P51508 661 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 SUPT4H1P63272 117 aaKnown RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 CHRFAM7AQ494W8 412 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 C20orf204Q6ZNR8 217 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 OR6K3Q8NGY3 331 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 KLF14Q8TD94 323 aaPredicted RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 NANOS1Q8WY41 292 aaKnown RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF442Q9H7R0 627 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 TINAGQ9UJW2 476 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 GPR132Q9UNW8 380 aa6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 NOP16Q9Y3C1 178 aaKnown RBP6.32□□□□□ -1.4
SRFBP1-201ENST00000339397 TRAV39A0A0B4J263 110 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM25EA8MYX2 175 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MKRN2OSH3BPM6 223 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 CDIPTO14735 213 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 FCGR3AP08637 254 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM27E3Q08E93 113 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC9A3R2Q15599 337 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 TBR1Q16650 682 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 IGSF11Q5DX21 431 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 VAX1Q5SQQ9 334 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF826PQ6ZT77 177 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5A2Q8NGI9 324 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF2Q9BSG1 426 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 WDR13Q9H1Z4 485 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 CDH20Q9HBT6 801 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 H3BUI4 141 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 GRPP07492 148 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 PRKACAP17612 351 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 BMP5P22003 454 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 NFYAP23511 347 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 SORDQ00796 357 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 LRP11Q86VZ4 500 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 LHFPL1Q86WI0 220 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 RDH5Q92781 318 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 DPCDQ9BVM2 203 aaPredicted RBP6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 PPA2Q9H2U2 334 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 PROCRQ9UNN8 238 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 OSGIN2Q9Y236 505 aa6.31□□□□□ -1.4
SRFBP1-201ENST00000339397 DIDO1Q9BTC0 2240 aaKnown RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 PLSCR5A0PG75 271 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 MEX3AA1L020 520 aaKnown RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ARPC5O15511 151 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 PDCD6O75340 191 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ADAP1O75689 374 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5H8P0DN80 308 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CBR1P16152 277 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 FUT3P21217 361 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 MPZP25189 248 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CD34P28906 385 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 AP2S1P53680 142 aaPredicted RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF154Q13106 437 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 IKZF1Q13422 519 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 MPPED2Q15777 294 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 GRK1Q15835 563 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ZBTB37Q5TC79 503 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF660Q6AZW8 331 aaPredicted RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CLEC18BQ6UXF7 455 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 FBXW12Q6X9E4 464 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 LYG2Q86SG7 212 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 SCCPDHQ8NBX0 429 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5L1Q8NGL2 311 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CCDC107Q8WV48 283 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 S100PBPQ96BU1 408 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 HIST1H2AAQ96QV6 131 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 OR51I2Q9H344 312 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 IL36GQ9NZH8 169 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 HSF4Q9ULV5 492 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 FXYD6-FXYD2A0A087WZ82 144 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 TRAV14DV4A0A0A6YYC5 116 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 F5H5P2 479 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 TRAPPC2LH3BP13 241 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms