RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CHST1O43916 411 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 FBXO24O75426 580 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 APOL3O95236 402 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 HAND1O96004 215 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF20P17024 532 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 MTCP1P56278 107 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 CDC42P60953 191 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ACTA2P62736 377 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ACTG2P63267 376 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ACTC1P68032 377 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ACTA1P68133 377 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 GRK1Q15835 563 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 NSUN5P1Q3KNT7 163 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 TMEM244Q5VVB8 128 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 SSX6Q7RTT6 188 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 KCTD20Q7Z5Y7 419 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 TMEM219Q86XT9 240 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 OR4S1Q8NGB4 309 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 CFHR4Q92496 578 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 MYCBPQ99417 103 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-202ENST00000337571 CIB1Q99828 191 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 CHST5Q9GZS9 411 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 IMPAD1Q9NX62 359 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 PCDHGB5Q9Y5G0 923 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 HILPDAQ9Y5L2 63 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 ORC6Q9Y5N6 252 aa8.62□□□□□ -1.03
CAPN3-202ENST00000337571 NOTCH1P46531 2555 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 F8VVB4 439 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 F8VWA3 439 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 SH2D1BO14796 132 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 MGST3O14880 152 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 XPNPEP2O43895 674 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF737O75373 536 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 CIB2O75838 187 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 ALDOBP05062 364 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 PRKACBP22694 351 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 DUSP1P28562 367 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 ARHGDIBP52566 201 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 DLX6P56179 175 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 IL18R1Q13478 541 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 MINOS1Q5TGZ0 78 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF626Q68DY1 528 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 OR52W1Q6IF63 320 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 CCDC121Q6ZUS5 278 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 RDH10Q8IZV5 341 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 FAM58AQ8N1B3 248 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 PRSS35Q8N3Z0 413 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 DNAAF1Q8NEP3 725 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 OR4F17Q8NGA8 305 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 NDNFQ8TB73 568 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 CAPSLQ8WWF8 208 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 TRUB1Q8WWH5 349 aaKnown RBP8.61□□□□□ -1.03
CAPN3-202ENST00000337571 STMN2Q93045 179 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 EME1Q96AY2 570 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 FGGYQ96C11 551 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-202ENST00000337571 OR4F4Q96R69 305 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 OSBPL10Q9BXB5 764 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 CHST6Q9GZX3 395 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 SEBOXQ9HB31 216 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-202ENST00000337571 NEK6Q9HC98 313 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 SESN1Q9Y6P5 492 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 WNK1Q9H4A3 2382 aa8.61□□□□□ -1.03
CAPN3-202ENST00000337571 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 LOC107986453A0A1B0GWG9 222 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 DAPL1A0PJW8 107 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 TMEM82A0PJX8 343 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 A6NDX4 124 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 G3V4G9 280 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 PRKACAP17612 351 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 ATF1P18846 271 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 HTR1DP28221 377 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 BRS3P32247 399 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 POLR2IP36954 125 aaKnown RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 POU3F4P49335 361 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 DYNLT3P51808 116 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 SNU13P55769 128 aaKnown RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 HABP2Q14520 560 aaPredicted RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 KPNB1Q14974 876 aaKnown RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 TP53I3Q53FA7 332 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 SPIN3Q5JUX0 258 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 LHFPL2Q6ZUX7 228 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 REC114Q7Z4M0 266 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 LYG1Q8N1E2 194 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 DYNAPQ8N1N2 210 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 R3HDM4Q96D70 268 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 MRPL48Q96GC5 212 aaKnown RBP8.6□□□□□ -1.03
CAPN3-202ENST00000337571 AKR1E2Q96JD6 320 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 OR5M11Q96RB7 305 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 CLEC7AQ9BXN2 247 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 GABARAPL3Q9BY60 117 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 GAL3ST2Q9H3Q3 398 aa8.6□□□□□ -1.03
CAPN3-202ENST00000337571 ZNF702PQ9H963 129 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms