RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OR8B3Q8NGG8 313 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR8B2Q96RD0 313 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 KCNK15Q9H427 330 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 BANF2Q9H503 90 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4Q9UBX2 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF222Q9UK12 451 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 CR1P17927 2039 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 AIPO00170 330 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 NOL3O60936 208 aaKnown RBP11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 BPNT1O95861 308 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 HAND1O96004 215 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL1AP01583 271 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC2A2P11168 524 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 GTF2F2P13984 249 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 RANBP1P43487 201 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 PITPNBP48739 271 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMBIM6P55061 237 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 SEC61A1P61619 476 aaKnown RBP11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL13RA1P78552 427 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 SCN1BQ07699 218 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 IKZF1Q13422 519 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 PDCD1Q15116 288 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR10K2Q6IF99 312 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 SFXN4Q6P4A7 337 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 SDSLQ96GA7 329 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 MED30Q96HR3 178 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 COX4I2Q96KJ9 171 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 OTOGQ6ZRI0 2925 aa11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3B-202ENST00000335760 A0A0B4J203 849 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 SH2D1BO14796 132 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 NDUFB3O43676 98 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 MPIG6BO95866 241 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CHRM2P08172 466 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 VSIG8P0DPA2 414 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 SELLP14151 372 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ARSBP15848 533 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 MGMTP16455 207 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CPT2P23786 658 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CFPP27918 469 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CAPZA1P52907 286 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 RBM11P57052 281 aaKnown RBP11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 COL10A1Q03692 680 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 BLMHQ13867 455 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 C2orf76Q3KRA6 126 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ESCO2Q56NI9 601 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF561Q8N587 486 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMEM104Q8NE00 496 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR51D1Q8NGF3 324 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR51T1Q8NGJ9 327 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 RAB2BQ8WUD1 216 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 FAM3DQ96BQ1 224 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 SELENOIQ9C0D9 397 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CST11Q9H112 138 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 LIN7BQ9HAP6 207 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 MAB21L2Q9Y586 359 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 CEPT1Q9Y6K0 416 aa11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF469Q96JG9 3925 aaPredicted RBP11.72□□□□□ -0.53
APOBEC3B-202ENST00000335760 ITPR3Q14573 2671 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 CCDC160A6NGH7 325 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMEM14DPA8MWL7 114 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 SIRPB1O00241 398 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 DVL1O14640 695 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 DEGS1O15121 323 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 CD99P14209 185 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF44P15621 663 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 GNB2P62879 340 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 QRFPP83859 136 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 UNC119Q13432 240 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 NHLRC3Q5JS37 347 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 IDNKQ5T6J7 187 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 WDR25Q64LD2 544 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 Q6P435 159 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 USP43Q70EL4 1123 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 FGFRL1Q8N441 504 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 ASCC1Q8N9N2 400 aaKnown RBP11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMEM185AQ8NFB2 350 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 KCNG3Q8TAE7 436 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 NDNFQ8TB73 568 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 BCL7BQ9BQE9 202 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms