RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PLEKHA2Q9HB19 425 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 FPR2P25090 351 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 ACKR3P25106 362 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 CEACAM3P40198 252 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-201ENST00000334490 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 OR5A2Q8NGI9 324 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
C9orf47-201ENST00000334490 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 STARD10Q9Y365 291 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 SULT1A3P0DMM9 295 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 SULT1A4P0DMN0 295 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 CTSSP25774 331 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 CCL8P80075 99 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 IGFBP7Q16270 282 aa13.16□□□□□ -0.3
C9orf47-201ENST00000334490 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
C9orf47-201ENST00000334490 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
C9orf47-201ENST00000334490 OR2D2Q9H210 308 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 TAAR5O14804 337 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 CYTIPO60759 359 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 HAND1O96004 215 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 C1QBP02746 253 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 OR10J4P0C629 311 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
C9orf47-201ENST00000334490 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
C9orf47-201ENST00000334490 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 GINS3Q9BRX5 216 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 PTPRFP10586 1907 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
C9orf47-201ENST00000334490 NPBWR1P48145 328 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 ADAM5Q6NVV9 412 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 SLC16A12Q6ZSM3 486 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 SKA3Q8IX90 412 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 PXT1Q8NFP0 134 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 LIMS1P48059 325 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 ARL16Q0P5N6 197 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 GVQW1Q8N7I0 195 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 TMED6Q8WW62 240 aa13.15□□□□□ -0.3
C9orf47-201ENST00000334490 M0QZ24 198 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 NME2P1O60361 137 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 MGST1P10620 155 aaKnown RBP13.14□□□□□ -0.31
C9orf47-201ENST00000334490 BCL3P20749 454 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 OR5AP2Q8NGF4 316 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 PECRQ9BY49 303 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 ARHGEF17Q96PE2 2063 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-201ENST00000334490 SOCS1O15524 211 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 LPAR6P43657 344 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 NUBP1P53384 320 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 LCN15Q6UWW0 184 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 YIPF5Q969M3 257 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 CHST5Q9GZS9 411 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 TRAV8-7A0A075B6U6 113 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 C17orf51A8MQB3 221 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 DCTN6O00399 190 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 IL5P05113 134 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 CSN1S1P47710 185 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 MOB3AQ96BX8 217 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 MAP6Q96JE9 813 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 ADGRG7Q96K78 797 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 TMEM56Q96MV1 263 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 ZNHIT1O43257 154 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 UCP2P55851 309 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 KLRB1Q12918 225 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 CLN8Q9UBY8 286 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 AK3Q9UIJ7 227 aa13.14□□□□□ -0.31
C9orf47-201ENST00000334490 OR7C2O60412 319 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 NDUFB6O95139 128 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 PGA4P0DJD7 388 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 TAS2R45P59539 299 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 SVBPQ8N300 66 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 ZDHHC22Q8N966 263 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 WDFY2Q96P53 400 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 KLHDC2Q9Y2U9 406 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 AMMECR1Q9Y4X0 333 aaPredicted RBP13.13□□□□□ -0.31
C9orf47-201ENST00000334490 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 CEBPEQ15744 281 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
C9orf47-201ENST00000334490 LPAR2Q9HBW0 351 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 POLEQ07864 2286 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 FAM157AC9JC47 383 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 CST7O76096 145 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 TXNDC12O95881 172 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 FAM87AP0C7U9 286 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 MRPS11P82912 194 aaKnown RBP13.13□□□□□ -0.31
C9orf47-201ENST00000334490 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
C9orf47-201ENST00000334490 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 LALBAP00709 142 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms