RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 C1orf123Q9NWV4 160 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 B4GALT7Q9UBV7 327 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 PRR14LQ5THK1 2151 aa16.33■□□□□ 0.2
RFTN1-201ENST00000334133 FBXO24O75426 580 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 TNFSF15O95150 251 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF708P17019 499 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 BCL3P20749 454 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 DAZAP2Q15038 168 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-201ENST00000334133 PLEKHN1Q494U1 663 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-201ENST00000334133 RTN4IP1Q8WWV3 396 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-201ENST00000334133 PHYHIPLQ96FC7 376 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 PARPBPQ9NWS1 579 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 SYNGR4O95473 234 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 MT-CO3P00414 261 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 MALLQ13021 153 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 LYZL2Q7Z4W2 148 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 STARD10Q9Y365 291 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 SVILO95425 2214 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 CRYM-AS1A6NIL9 109 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 M0R296 226 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 TERTO14746 1132 aaKnown RBP16.32■□□□□ 0.2
RFTN1-201ENST00000334133 ACTL6AO96019 429 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 CTSDP07339 412 aaPredicted RBP16.32■□□□□ 0.2
RFTN1-201ENST00000334133 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF488Q96MN9 340 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 C1QTNF5Q9BXJ0 243 aa16.32■□□□□ 0.2
RFTN1-201ENST00000334133 IGHV3-64DA0A0J9YX35 117 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 A0A1B0GW55 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 XRCC2O43543 280 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 LILRA1O75019 489 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L2P0CJ85 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L3P0CJ86 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L4P0CJ87 422 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L5P0CJ88 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L6P0CJ89 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4L7P0CJ90 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 RBM11P57052 281 aaKnown RBP16.31■□□□□ 0.2
RFTN1-201ENST00000334133 RAB1AP62820 205 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 PRDX4Q13162 271 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 IL15RAQ13261 267 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 EIF4E3Q8N5X7 224 aaKnown RBP16.31■□□□□ 0.2
RFTN1-201ENST00000334133 IL22RA1Q8N6P7 574 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 MARC2Q969Z3 335 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 HRH4Q9H3N8 390 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 DUX4Q9UBX2 424 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 PRSS50Q9UI38 385 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 HSF4Q9ULV5 492 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF705EA8MWA4 302 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-201ENST00000334133 HIKESHIQ53FT3 197 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 RTL6Q6ICC9 239 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 TMPRSS7Q7RTY8 843 aa16.31■□□□□ 0.2
RFTN1-201ENST00000334133 CPNE2Q96FN4 548 aaPredicted RBP16.31■□□□□ 0.2
RFTN1-201ENST00000334133 PDCD6O75340 191 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 F12P00748 615 aaPredicted RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 ID4P47928 161 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 MEOX1P50221 254 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 SURF2Q15527 256 aaPredicted RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 SPATA46Q5T0L3 261 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 MEX3BQ6ZN04 569 aaKnown RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 MRPL21Q7Z2W9 205 aaKnown RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 SLC5A7Q9GZV3 580 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 A0A1W2PR80 420 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 AGPAT2O15120 278 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 RRP8O43159 456 aaKnown RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 LRP3O75074 770 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 CA11O75493 328 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 PPA1Q15181 289 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 HES3Q5TGS1 186 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 ASCL4Q6XD76 172 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF100Q8IYN0 542 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 SLC30A7Q8NEW0 376 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 APH1AQ96BI3 265 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 BSCL2Q96G97 398 aaPredicted RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 RGCCQ9H4X1 137 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF552Q9H707 407 aaPredicted RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 SLC2A9Q9NRM0 540 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 EDARQ9UNE0 448 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 MRPS18CQ9Y3D5 142 aaKnown RBP16.3■□□□□ 0.2
RFTN1-201ENST00000334133 ESPL1Q14674 2120 aa16.3■□□□□ 0.2
RFTN1-201ENST00000334133 FAM74A7A6NL05 159 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 BET1O15155 118 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 HKR1P10072 659 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 NME2P22392 152 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 AADACP22760 399 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 FAM74A3Q4VXF1 159 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 HPSE2Q8WWQ2 592 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 CNTNAP3BQ96NU0 1288 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 CNTNAP3Q9BZ76 1288 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 GPR31O00270 319 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 TSC22D1Q15714 1073 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 STOML3Q8TAV4 291 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 NEK7Q8TDX7 302 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 AQP10Q96PS8 301 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 FAM96BQ9Y3D0 163 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF732B4DXR9 585 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 ABCD4O14678 606 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 IFNA21P01568 189 aa16.29■□□□□ 0.2
RFTN1-201ENST00000334133 ZNF883P0CG24 379 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms