RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 NAT2P11245 290 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 TMEM33P57088 247 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 ZXDAP98168 799 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 IGFBP7Q16270 282 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 AWAT1Q58HT5 328 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 IGSF11Q5DX21 431 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 DCAF12Q5T6F0 453 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 THOC3Q96J01 351 aaKnown RBP16.53■□□□□ 0.24
LAMP1-201ENST00000332556 LOC102725191A0A1B0GVB3 256 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 C5orf52A6NGY3 159 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 CEACAM18A8MTB9 384 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 M0R036 132 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 PET100P0DJ07 73 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 ZNF616Q08AN1 781 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 FABP9Q0Z7S8 132 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 FAM209BQ5JX69 171 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 TMEM268Q5VZI3 342 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 LINC00696Q6ZRV3 163 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 ERGIC1Q969X5 290 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 SIGLEC12Q96PQ1 595 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 OCSTAMPQ9BR26 566 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 CHST5Q9GZS9 411 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 GSN-AS1Q9NRJ2 163 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 ANAPC10Q9UM13 185 aa16.53■□□□□ 0.24
LAMP1-201ENST00000332556 SHANK1Q9Y566 2161 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 A0A1W2PNU3 283 aaPredicted RBP16.52■□□□□ 0.24
LAMP1-201ENST00000332556 C1QL1O75973 258 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 DVL1P1P54792 670 aaPredicted RBP16.52■□□□□ 0.24
LAMP1-201ENST00000332556 PSG4Q00888 419 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.24
LAMP1-201ENST00000332556 ACTBL2Q562R1 376 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 EIF5AL1Q6IS14 154 aaKnown RBP16.52■□□□□ 0.24
LAMP1-201ENST00000332556 CNTNAP3Q9BZ76 1288 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 LIME1Q9H400 295 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 RNF122Q9H9V4 155 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 DNAJB11Q9UBS4 358 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 FBLN5Q9UBX5 448 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 ZMAT5Q9UDW3 170 aaKnown RBP16.52■□□□□ 0.24
LAMP1-201ENST00000332556 V9GYS6 101 aa16.52■□□□□ 0.24
LAMP1-201ENST00000332556 ZNF716A6NP11 495 aa16.52■□□□□ 0.23
LAMP1-201ENST00000332556 MIDNQ504T8 468 aa16.52■□□□□ 0.23
LAMP1-201ENST00000332556 VASH2Q86V25 355 aa16.52■□□□□ 0.23
LAMP1-201ENST00000332556 CCDC163A0A0D9SF12 145 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 TXNL1O43396 289 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 CST4P01036 141 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 IGLV3-1P01715 115 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 ARG1P05089 322 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 S100A9P06702 114 aaKnown RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 PRF1P14222 555 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 DUSP3P51452 185 aaPredicted RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 RAC3P60763 192 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 CHRFAM7AQ494W8 412 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 TSPO2Q5TGU0 170 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 GPR137CQ8N3F9 429 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 C15orf54Q8N8G6 183 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 SEMA6DQ8NFY4 1073 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 HAS2Q92819 552 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 TOMM40LQ969M1 308 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 SPTSSAQ969W0 71 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 MRPL24Q96A35 216 aaKnown RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 CRIM1Q9NZV1 1036 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 EP300Q09472 2414 aaPredicted RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 SYNGR3O43761 229 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 ZNF14P17017 642 aaPredicted RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 RBMXP38159 391 aaKnown RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 OR2B8PP59922 312 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 ZNF92Q03936 586 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 SP6Q3SY56 376 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 PIGCQ92535 297 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 NUDT16L1Q9BRJ7 211 aaKnown RBP16.51■□□□□ 0.23
LAMP1-201ENST00000332556 OR51B6Q9H340 312 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
LAMP1-201ENST00000332556 TRBV23-1A0A0A0MS06 115 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 IGKV1-12A0A0C4DH73 117 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 C7orf77A4D0Y5 90 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 TSPAN15O95858 294 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 IFNA2P01563 188 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 IGKV1D-12P01611 117 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 THBS4P35443 961 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 NOVA1P51513 510 aaKnown RBP16.5■□□□□ 0.23
LAMP1-201ENST00000332556 FAM27BQ5VT28 67 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 SCGB3A2Q96PL1 93 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 ZNF2Q9BSG1 426 aaPredicted RBP16.5■□□□□ 0.23
LAMP1-201ENST00000332556 SPACA1Q9HBV2 294 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 PARP11Q9NR21 331 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 GHRLQ9UBU3 117 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 TIMM10BQ9Y5J6 103 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 GEMIN2O14893 280 aaKnown RBP16.5■□□□□ 0.23
LAMP1-201ENST00000332556 JMJD7P0C870 316 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 FOLR2P14207 255 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 OTX1P32242 354 aaPredicted RBP16.5■□□□□ 0.23
LAMP1-201ENST00000332556 FXYD4P59646 89 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 SLC16A14Q7RTX9 510 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 OR1F12Q8NHA8 337 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 PSMF1Q92530 271 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 FOXB1Q99853 325 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 EIF5A2Q9GZV4 153 aaKnown RBP16.5■□□□□ 0.23
LAMP1-201ENST00000332556 LRFN1Q9P244 771 aa16.5■□□□□ 0.23
LAMP1-201ENST00000332556 C14orf166Q9Y224 244 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms