RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 C18orf12Q96KH6 178 aa15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 FAM210BQ96KR6 192 aa15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 HDHD3Q9BSH5 251 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 LIME1Q9H400 295 aa15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 DCAF16Q9NXF7 216 aa15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 POLR1DQ9Y2S0 133 aa15.8■□□□□ 0.12
CLSTN3-202ENST00000331148 IGHV5-51A0A0C4DH38 117 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 NPIPB13A6NJU9 1138 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 NPIPB4C9JG80 1138 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 TCAPO15273 167 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 DDAH2O95865 285 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 HSPB1P04792 205 aaKnown RBP15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 CCL1P22362 96 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 CEACAM6P40199 344 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 PPA1Q15181 289 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 KISS1Q15726 138 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 CRIP3Q6Q6R5 217 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 C6orf201Q7Z4U5 140 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 NPRL2Q8WTW4 380 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 TSLPQ969D9 159 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 BOD1Q96IK1 185 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 EMC6Q9BV81 110 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 ZNF700Q9H0M5 742 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 CRLF2Q9HC73 371 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 SOHLH2Q9NX45 425 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 HSF4Q9ULV5 492 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 WSB1Q9Y6I7 421 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 MSTNO14793 375 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 CSNK1A1P48729 337 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 BIDP55957 195 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 ZNF506Q5JVG8 444 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 TSPO2Q5TGU0 170 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 RTL6Q6ICC9 239 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 C1orf87Q8N0U7 546 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 LRTM2Q8N967 370 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 RTN4IP1Q8WWV3 396 aaPredicted RBP15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 TM2D1Q9BX74 207 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 LANCL2Q9NS86 450 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 FAM86C1Q9NVL1 165 aa15.79■□□□□ 0.12
CLSTN3-202ENST00000331148 IGHV1OR21-1A0A087WYE8 117 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 C9J4A7 227 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 TMEM225BP0DP42 221 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ALDH3B1P43353 468 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ARL6IP1Q15041 203 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ABCA11PQ4W5N1 156 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 DOK3Q7L591 496 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 C9orf40Q8IXQ3 194 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 CHRNA10Q9GZZ6 450 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ANXA10Q9UJ72 324 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 PCDH15Q96QU1 1955 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 LAMA1P25391 3075 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 A8MWP6 167 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 SNRPCP09234 159 aaKnown RBP15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ZNF728P0DKX0 622 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 SFTPDP35247 375 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 TLE3Q04726 772 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 ZNF266Q14584 549 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 C4orf17Q53FE4 359 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 LIAT1Q6ZQX7 453 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 SLC38A9Q8NBW4 561 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 RCC1LQ96I51 464 aaKnown RBP15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 TMEM68Q96MH6 324 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 CHST11Q9NPF2 352 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 KLHL13Q9P2N7 655 aa15.78■□□□□ 0.12
CLSTN3-202ENST00000331148 FAM230AA0A1W2PPH8 454 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 STMND1H3BQB6 276 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 PHOX2AO14813 284 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 ATXN7O15265 892 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 USF2Q15853 346 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 HLA-DQA1Q5Y7H0 255 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 SP5Q6BEB4 398 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 PLXDC1Q8IUK5 500 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 FBXL14Q8N1E6 418 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 OR2AJ1Q8NGZ0 328 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 OR14L1PQ8NHC6 308 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 SNX22Q96L94 193 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 VN1R1Q9GZP7 353 aa15.77■□□□□ 0.12
CLSTN3-202ENST00000331148 TECTAO75443 2155 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 PHF3Q92576 2039 aaKnown RBP15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 DUX1O43812 170 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 MYF5P13349 255 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 FGF7P21781 194 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 DCAF7P61962 342 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 OR8G1Q15617 311 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 FAM57BQ71RH2 274 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 PLPP5Q8NEB5 264 aa15.77■□□□□ 0.11
CLSTN3-202ENST00000331148 TNRC6BQ9UPQ9 1833 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 CACNA1EQ15878 2313 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 CCDC187A0A096LP49 1063 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 FAM24AA6NFZ4 105 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 TMEM150CB9EJG8 249 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 TGOLN2O43493 480 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 PITX3O75364 302 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 PGA4P0DJD7 388 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 PGA5P0DJD9 388 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 GLI4P10075 376 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 GABRR1P24046 479 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 EPHA8P29322 1005 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 HLA-DRB3P79483 266 aa15.76■□□□□ 0.11
CLSTN3-202ENST00000331148 GNMTQ14749 295 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms