RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NCOA6Q14686 2063 aaPredicted RBP12.59□□□□□ -0.39
SNX20-202ENST00000330943 RALGAPA1Q6GYQ0 2036 aa12.59□□□□□ -0.39
SNX20-202ENST00000330943 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
SNX20-202ENST00000330943 HSD17B6O14756 317 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 BRICD5Q6PL45 260 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 CPEB2Q7Z5Q1 589 aaKnown RBP12.58□□□□□ -0.39
SNX20-202ENST00000330943 ZNF429Q86V71 674 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 LGI3Q8N145 548 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 SUMF1Q8NBK3 374 aa12.58□□□□□ -0.39
SNX20-202ENST00000330943 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 A0A1B0GV90 55 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 PPP1R2P9O14990 202 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 SOD3P08294 240 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SRP19P09132 144 aaKnown RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 RNF224P0DH78 156 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 MYF5P13349 255 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SFTPDP35247 375 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SUMO3P55854 103 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 NKX6-1P78426 367 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 CYB561D1Q8N8Q1 229 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 MSI2Q96DH6 328 aaKnown RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 ZDHHC12Q96GR4 267 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 GPR27Q9NS67 375 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 OR5H15A6NDH6 313 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SPRY1O43609 319 aaPredicted RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 F10P00742 488 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 TRGC2P03986 189 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SSTP61278 116 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 OR2C3Q8N628 320 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 LRTM2Q8N967 370 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
SNX20-202ENST00000330943 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
SNX20-202ENST00000330943 ONECUT2O95948 504 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 FOSL1P15407 271 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 HIST1H1BP16401 226 aaKnown RBP12.57□□□□□ -0.4
SNX20-202ENST00000330943 MTCP1P56278 107 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 GAMTQ14353 236 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 ZNF266Q14584 549 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 RSU1Q15404 277 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 SLC22A25Q6T423 547 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 SSX9Q7RTT3 188 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 OR6X1Q8NH79 312 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 HSF4Q9ULV5 492 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 V9GYS6 101 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 CACNA1EQ15878 2313 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 DBHP09172 617 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 DRD1P21728 446 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 FBXL14Q8N1E6 418 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 POC1BQ8TC44 478 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 MEGF10Q96KG7 1140 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
SNX20-202ENST00000330943 A0A087WWC5 75 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 ZNF724A8MTY0 619 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 IGLV3-1P01715 115 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 RBP2P50120 134 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 CCR5P51681 352 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 EIF3IQ13347 325 aaKnown RBP12.56□□□□□ -0.4
SNX20-202ENST00000330943 PLPPR5Q32ZL2 321 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 OR4D5Q8NGN0 318 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 NIPSNAP3BQ9BS92 247 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 BCO1Q9HAY6 547 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 SLC7A11Q9UPY5 501 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 WSB1Q9Y6I7 421 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 FAM230AA0A1W2PPH8 454 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 FOLR1P15328 257 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 ICAM4Q14773 271 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 KCNMB1Q16558 191 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 P4HA3Q7Z4N8 544 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 MRGPRX4Q96LA9 322 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 TP53RKQ96S44 253 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
SNX20-202ENST00000330943 GPR179Q6PRD1 2367 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 SHANK1Q9Y566 2161 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 A0A0U1RQV5 110 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 SCAF4O95104 1147 aaKnown RBP12.55□□□□□ -0.4
SNX20-202ENST00000330943 FABP4P15090 132 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 GUCA1AP43080 201 aaPredicted RBP12.55□□□□□ -0.4
SNX20-202ENST00000330943 PRSS12P56730 875 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 OR2T2Q6IF00 324 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 D2HGDHQ8N465 521 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms