RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CLEC18BQ6UXF7 455 aa13.96□□□□□ -0.17
SYNM-201ENST00000328642 ACOT7LQ6ZUV0 252 aa13.96□□□□□ -0.17
SYNM-201ENST00000328642 ST8SIA2Q92186 375 aa13.96□□□□□ -0.17
SYNM-201ENST00000328642 GP1BAP07359 652 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 ACKR3P25106 362 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 ZFP36L1Q07352 338 aaKnown RBP13.96□□□□□ -0.18
SYNM-201ENST00000328642 UNC119Q13432 240 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 TEX30Q5JUR7 227 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 ZNF826PQ6ZT77 177 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 OR11L1Q8NGX0 322 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 SF3B5Q9BWJ5 86 aaKnown RBP13.96□□□□□ -0.18
SYNM-201ENST00000328642 MYO18BQ8IUG5 2567 aa13.96□□□□□ -0.18
SYNM-201ENST00000328642 ANKRD11Q6UB99 2663 aaPredicted RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 KRASP01116 189 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 IFI6P09912 130 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 GNG3P63215 75 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 RTL6Q6ICC9 239 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 OR14K1Q8NGZ2 314 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 CHST5Q9GZS9 411 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 LTBP2Q14767 1821 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 RPS27AP62979 156 aaKnown RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 SPINK9Q5DT21 86 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 FGFBP3Q8TAT2 258 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 CMTM3Q96MX0 182 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 ENY2Q9NPA8 101 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 CTDSPLO15194 276 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 RPL12P30050 165 aaKnown RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 UBA52P62987 128 aaKnown RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 ZNF816Q0VGE8 651 aaPredicted RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 ZNF169Q14929 603 aaPredicted RBP13.95□□□□□ -0.18
SYNM-201ENST00000328642 SPANXN5Q5MJ07 72 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 TMEM88Q6PEY1 159 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 ARRDC1Q8N5I2 433 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 ANGPTL6Q8NI99 470 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 SCARB1Q8WTV0 552 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 CXorf58Q96LI9 332 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 LIPGQ9Y5X9 500 aa13.95□□□□□ -0.18
SYNM-201ENST00000328642 WDFY4Q6ZS81 3184 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 MSTNO14793 375 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ST8SIA3O43173 380 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 PDCD6O75340 191 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
SYNM-201ENST00000328642 AKR1C3P42330 323 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 MECP2P51608 486 aaKnown RBP13.94□□□□□ -0.18
SYNM-201ENST00000328642 H2BFSP57053 126 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ENDOGQ14249 297 aaKnown RBP13.94□□□□□ -0.18
SYNM-201ENST00000328642 RNPS1Q15287 305 aaKnown RBP13.94□□□□□ -0.18
SYNM-201ENST00000328642 FGF11Q92914 225 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 CNTNAP3BQ96NU0 1288 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 TAF9BQ9HBM6 251 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 RPS10P5Q9NQ39 176 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 SLC17A5Q9NRA2 495 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 C7orf66A4D0T2 115 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 TOR1AO14656 332 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ZNF718Q3SXZ3 478 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 JMJD6Q6NYC1 403 aaPredicted RBP13.94□□□□□ -0.18
SYNM-201ENST00000328642 FAM58AQ8N1B3 248 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ANXA10Q9UJ72 324 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 CSPG4Q6UVK1 2322 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 FIGNL2A6NMB9 653 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 SYNGR1O43759 233 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 CST2P09228 141 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 CD80P33681 288 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 PPP1CBP62140 327 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 Q0VFX4 171 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ZNF260Q3ZCT1 412 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 TOR2AQ5JU69 321 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 ZNF391Q9UJN7 358 aa13.94□□□□□ -0.18
SYNM-201ENST00000328642 PUS1Q9Y606 427 aaKnown RBP eCLIP13.94□□□□□ -0.18
SYNM-201ENST00000328642 H7C2Y5 167 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 MPC2O95563 127 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 CEBPDP49716 269 aaPredicted RBP13.93□□□□□ -0.18
SYNM-201ENST00000328642 PDZK1IP1Q13113 114 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 ZNF674Q2M3X9 581 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 IGSF11Q5DX21 431 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 GFRALQ6UXV0 394 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 WDFY1Q8IWB7 410 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 LY6G6EA0A0G2JKS1 128 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 ELLP55199 621 aaPredicted RBP13.93□□□□□ -0.18
SYNM-201ENST00000328642 PPP1R35Q8TAP8 253 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 SLC25A40Q8TBP6 338 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 SAV1Q9H4B6 383 aaPredicted RBP13.93□□□□□ -0.18
SYNM-201ENST00000328642 U3KQA8 63 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 DOCK11Q5JSL3 2073 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 KIR2DS1A0A191URI9 304 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 ACP1P24666 158 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 KIR2DS4P43632 304 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 KIR2DS1Q14954 304 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 PRAMEF6Q5VXH4 476 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 TMEM182Q6ZP80 229 aaPredicted RBP13.93□□□□□ -0.18
SYNM-201ENST00000328642 SLC26A1Q9H2B4 701 aa13.93□□□□□ -0.18
SYNM-201ENST00000328642 GHRLQ9UBU3 117 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms