RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MVDP53602 400 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ATP6V1FQ16864 119 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 METRNLQ641Q3 311 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ERASQ7Z444 233 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 WBP2Q969T9 261 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 CIB3Q96Q77 187 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 FOXJ3Q9UPW0 622 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 A0A1B0GTH9 108 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 GFYI3L273 518 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 APCSP02743 223 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 TAS2R60P59551 318 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 LSM11P83369 360 aaKnown RBP eCLIP7.07□□□□□ -1.28
CIITA-201ENST00000324288 COL19A1Q14993 1142 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 OR1L3Q8NH93 324 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 SDF2Q99470 211 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 THAP10Q9P2Z0 257 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 LTBP3Q9NS15 1303 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PRSS37A4D1T9 235 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 FZD6O60353 706 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PCP4P48539 62 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 BVESQ8NE79 360 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 KISS1RQ969F8 398 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 MCHR2Q969V1 340 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 KIF13BQ9NQT8 1826 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 TMSB15BA0A087X1C1 80 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ZBTB25P24278 435 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 RFESDQ8TAC1 157 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 BTAF1O14981 1849 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 TUBGCP6Q96RT7 1819 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 HPXP02790 462 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 TCTN1Q2MV58 587 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ZNF385CQ66K41 422 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 ASB16Q96NS5 453 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 R3HDMLQ9H3Y0 253 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 HSPB8Q9UJY1 196 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 LRP12Q9Y561 859 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 DNASE2O00115 360 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 ADAM11O75078 769 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 CA6P23280 308 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 SRP14P37108 136 aaKnown RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 CCL7P80098 99 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 RGS7BPQ6MZT1 257 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 C9orf62Q8N4C0 152 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 ARRDC1-AS1Q9H2J1 176 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 DHRS4L2Q6PKH6 230 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 KIR3DX1Q9H7L2 352 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 SLC25A19Q9HC21 320 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 SLC45A2Q9UMX9 530 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 TRGV10A0A0A0MS01 117 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 LDLRAD4O15165 306 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OR3A4PP47883 348 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ID4P47928 161 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 TCTN3Q6NUS6 607 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 C16orf82Q7Z2V1 217 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 SSMEM1Q8WWF3 244 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 GALMQ96C23 342 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZBP1Q9H171 429 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF205O95201 554 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 MPC2O95563 127 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 CCL2P13500 99 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 TPBGQ13641 420 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 LRRC10Q5BKY1 277 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 XAF1Q6GPH4 301 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 TUSC5Q8IXB3 177 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 SLC25A43Q8WUT9 341 aaPredicted RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 CLDN23Q96B33 292 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 WDR61Q9GZS3 305 aaKnown RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 NTMQ9P121 344 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 FCMRO60667 390 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 CRISP2P16562 243 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 WNT3P56703 355 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 HLA-DRB3P79483 266 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 NTNG2Q96CW9 530 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 HSPB9Q9BQS6 159 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 NAA60Q9H7X0 242 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 MRPL37Q9BZE1 423 aaKnown RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 B9D1Q9UPM9 204 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 GPR179Q6PRD1 2367 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 TRAV1-2A0A0B4J238 106 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
CIITA-201ENST00000324288 SKP2Q13309 424 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ALKAL1Q6UXT8 129 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF547Q8IVP9 402 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 GVQW1Q8N7I0 195 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OXGR1Q96P68 337 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 CRYBG1Q9Y4K1 1723 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 DUXBA0A1W2PPF3 345 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 EIF4E2O60573 245 aaKnown RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 CST4P01036 141 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF141Q15928 474 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms