RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 THOC3Q96J01 351 aaKnown RBP6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM204Q9BSN7 226 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CBR3O75828 277 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 OR2J2O76002 312 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 HSPB1P04792 205 aaKnown RBP6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CLEC3BP05452 202 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 EFNB1P98172 346 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM91Q6ZNR0 172 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 PPP1R35Q8TAP8 253 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 LRFN3Q9BTN0 628 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 RNF208Q9H0X6 261 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 KCNAB3O43448 404 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 ONECUT2O95948 504 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A6P0DMU7 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A5P0DMU8 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A7P0DMV0 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 FHITP49789 147 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 GPM6AP51674 278 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 SIGLEC14Q08ET2 396 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 ACKR1Q16570 336 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 HIKESHIQ53FT3 197 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A1Q5HYN5 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-201ENST00000322213 BPIFA4PQ86YQ2 179 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TSTD1Q8NFU3 115 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A3Q8NHU0 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 APH1AQ96BI3 265 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 P4HTMQ9NXG6 502 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 OR5AC2Q9NZP5 309 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF346Q9UL40 294 aaKnown RBP6.3□□□□□ -1.4
SMC1A-201ENST00000322213 PPOXP50336 477 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 DPTQ07507 201 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF750Q32MQ0 723 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 WDR38Q5JTN6 314 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 KIR3DX1Q9H7L2 352 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 A0A087WUJ7 227 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CXorf51AA0A1B0GTR3 108 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 C2orf72A6NCS6 295 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TMPRSS11DO60235 418 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CT45A10P0DMU9 189 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 CD79AP11912 226 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 GLB1P16278 677 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 FAM219BQ5XKK7 198 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 DHRS11Q6UWP2 260 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 TCEAL8Q8IYN2 117 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 OR8B4Q96RC9 309 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 B3GAT1Q9P2W7 334 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 PPP1R3CQ9UQK1 317 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 STARD10Q9Y365 291 aa6.3□□□□□ -1.4
SMC1A-201ENST00000322213 IGLV3-16A0A075B6K0 115 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 P04436 131 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 FABP2P12104 132 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CLEC12BQ2HXU8 276 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 DEGS2Q6QHC5 323 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CDC14CA4D256 554 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 IAPPP10997 89 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 EMDP50402 254 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 MPV17LQ2QL34 196 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF770Q6IQ21 691 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF343Q6P1L6 599 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CISD2Q8N5K1 135 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ULBP2Q9BZM5 246 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 TUBA4BQ9H853 241 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ST3GAL6Q9Y274 331 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 DANCRP0C864 163 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CLEC18BQ6UXF7 455 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 C1QL4Q86Z23 238 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 OR1L6Q8NGR2 347 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CNTD2Q9H8S5 307 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 FRRS1LQ9P0K9 344 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 HSF4Q9ULV5 492 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CCL27Q9Y4X3 112 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SPINT2O43291 252 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 WDR1O75083 606 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 HLA-GP17693 338 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 FCER1GP30273 86 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 GGTLC2Q14390 218 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 RTL10Q7L3V2 364 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 OR4A4PQ8NGN8 299 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ZG16BQ96DA0 208 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SLC35E1Q96K37 410 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SPACA5Q96QH8 159 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CDC42EP2O14613 210 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 TOX3O15405 576 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ELNP15502 786 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 LPAR6P43657 344 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 REG4Q9BYZ8 158 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SLC17A4Q9Y2C5 497 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 C19orf48Q6RUI8 117 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 DNAJC4Q9NNZ3 241 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 EIF4E2O60573 245 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 HNRNPA1P09651 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms