RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 PLA2G3Q9NZ20 509 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 REV3LO60673 3130 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 E9PLN8 166 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 GPR37O15354 613 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 DEDDO75618 318 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 EIF3GO75821 320 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL3A1-202ENST00000317840 EPHA1P21709 976 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 MST1LQ2TV78 715 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 SNAI3Q3KNW1 292 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 PIGYQ3MUY2 71 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 ZFP62Q8NB50 900 aaPredicted RBP9.18□□□□□ -0.94
COL3A1-202ENST00000317840 OR11L1Q8NGX0 322 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 OR2G3Q8NGZ4 309 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 SGK3Q96BR1 496 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 CRLF2Q9HC73 371 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 C19orf12Q9NSK7 152 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 NRASP01111 189 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 MBPP02686 304 aaPredicted RBP9.18□□□□□ -0.94
COL3A1-202ENST00000317840 PRF1P14222 555 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 ESPL1Q14674 2120 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 HAGHQ16775 308 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 CDCP2Q5VXM1 449 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 SLC16A14Q7RTX9 510 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF561Q8N587 486 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 NAA60Q9H7X0 242 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 SLC2A9Q9NRM0 540 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 A0A1W2PPE2 198 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 C9JQL5 133 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 ONECUT2O95948 504 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF528Q3MIS6 628 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
COL3A1-202ENST00000317840 LHFPL1Q86WI0 220 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 RCL1Q9Y2P8 373 aaKnown RBP9.18□□□□□ -0.94
COL3A1-202ENST00000317840 MMP24Q9Y5R2 645 aa9.18□□□□□ -0.94
COL3A1-202ENST00000317840 CST7O76096 145 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 LSM6P62312 80 aaKnown RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 AAED1Q7RTV5 226 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 CLDN23Q96B33 292 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 BCO1Q9HAY6 547 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 PCNX1Q96RV3 2341 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 TRAV20A0A0B4J274 112 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 FAM24AA6NFZ4 105 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 CHATP28329 748 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 NKX2-1P43699 371 aaPredicted RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 C6orf15Q6UXA7 325 aaPredicted RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 C15orf54Q8N8G6 183 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 NFAM1Q8NET5 270 aaPredicted RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 LYZL4Q96KX0 146 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 SH3BGRL3Q9H299 93 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 CDRT15L2A8MXV6 281 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 ZNHIT1O43257 154 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 SSSCA1O60232 199 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 TNFSF15O95150 251 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 VAMP5O95183 116 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 RAB2AP61019 212 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 TSC22D1Q15714 1073 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 SLC25A26Q70HW3 274 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 CARFQ8N187 725 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 WDSUB1Q8N9V3 476 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 OR1J1Q8NGS3 322 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 GPHA2Q96T91 129 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 PAPOLGQ9BWT3 736 aaKnown RBP9.17□□□□□ -0.94
COL3A1-202ENST00000317840 FAM86C1Q9NVL1 165 aa9.17□□□□□ -0.94
COL3A1-202ENST00000317840 OR2C1O95371 312 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 IFNA17P01571 189 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 TK1P04183 234 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 SPINK2P20155 84 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF674Q2M3X9 581 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 C17orf82Q86X59 251 aaPredicted RBP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 OSR2Q8N2R0 312 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 OR52M1Q8NGK5 317 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF581Q9P0T4 197 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 TECTAO75443 2155 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 CRYM-AS1A6NIL9 109 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 GPR137BO60478 399 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 FABP1P07148 127 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 CCL3P10147 92 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF16P17020 682 aaPredicted RBP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF32P17041 273 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 S100A2P29034 98 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 UBE2KP61086 200 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 POLR2GP62487 172 aaKnown RBP eCLIP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 RHEBQ15382 184 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 PHYHD1Q5SRE7 291 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 SPSB1Q96BD6 273 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 BSCL2Q96G97 398 aaPredicted RBP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF407Q9C0G0 2248 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 GAPDHP04406 335 aaKnown RBP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 S100A8P05109 93 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 FCGR3AP08637 254 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 S100GP29377 79 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 FAM3AP98173 230 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 HNF4GQ14541 408 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 SUCNR1Q9BXA5 334 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms