RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 DLX6P56179 175 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 ACTA2P62736 377 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 ACTG2P63267 376 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 GALEQ14376 348 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 UBE2V2Q15819 145 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 KCTD21Q4G0X4 260 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 FAM220AQ7Z4H9 259 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 ANGPTL5Q86XS5 388 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 CCDC54Q8NEL0 328 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 MMP27Q9H306 513 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 HEXA-AS1Q9H8Q6 139 aa12.65□□□□□ -0.38
FOXR1-201ENST00000317011 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
FOXR1-201ENST00000317011 IGKV1-27A0A075B6S5 117 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 J3QLW9 94 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 M0QZ24 198 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 MYL12BO14950 172 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF737O75373 536 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 PAHP00439 452 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF19P17023 458 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 ERVFRD-1P60508 538 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 DEFA6Q01524 100 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 OR2G6Q5TZ20 316 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 DHRS7BQ6IAN0 325 aaPredicted RBP12.64□□□□□ -0.39
FOXR1-201ENST00000317011 PRSS48Q7RTY5 328 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 YIPF7Q8N8F6 280 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 C10orf35Q96D05 121 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
FOXR1-201ENST00000317011 C4orf36Q96KX1 117 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 SSX3Q99909 188 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF649Q9BS31 505 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 ISG20L2Q9H9L3 353 aaKnown RBP12.64□□□□□ -0.39
FOXR1-201ENST00000317011 MTCH1Q9NZJ7 389 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
FOXR1-201ENST00000317011 A0A1W2PPH5 198 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 ANKRD61A6NGH8 418 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 F8VVB4 439 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 F8VWA3 439 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 RPP14O95059 124 aaKnown RBP12.63□□□□□ -0.39
FOXR1-201ENST00000317011 NXPH2O95156 264 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 MAP2K4P45985 399 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
FOXR1-201ENST00000317011 FUT6P51993 359 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 OR12D2P58182 307 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 PDLIM3Q53GG5 364 aaPredicted RBP12.63□□□□□ -0.39
FOXR1-201ENST00000317011 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 PRSS35Q8N3Z0 413 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 OR4M1Q8NGD0 313 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 NR1H4Q96RI1 486 aaPredicted RBP12.63□□□□□ -0.39
FOXR1-201ENST00000317011 CDCA4Q9BXL8 241 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 GTF2A1LQ9UNN4 478 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 ERGIC3Q9Y282 383 aa12.63□□□□□ -0.39
FOXR1-201ENST00000317011 VGLL3A8MV65 326 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 H3BUX3 64 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 SYT7O43581 403 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 ANGPTL7O43827 346 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 CHRM2P08172 466 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 CAPZA1P52907 286 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF273Q14593 569 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 IRF3Q14653 427 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF773Q6PK81 442 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 SYS1Q8N2H4 156 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 MYCBPQ99417 103 aaPredicted RBP12.62□□□□□ -0.39
FOXR1-201ENST00000317011 MND1Q9BWT6 205 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 CHST5Q9GZS9 411 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 SLC7A11Q9UPY5 501 aa12.62□□□□□ -0.39
FOXR1-201ENST00000317011 hCG_1809904A0A1W2PP81 198 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 A0A1W2PPE2 198 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 A0A1W2PR64 198 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 A0A1W2PRV1 198 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 RBP4P02753 201 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 CCL3L1P16619 93 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 COL10A1Q03692 680 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 LRRC75BQ2VPJ9 315 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 RNLSQ5VYX0 342 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 FDX2Q6P4F2 183 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 KCTD20Q7Z5Y7 419 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 TSPAN14Q8NG11 270 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 OR52N1Q8NH53 320 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 PELI1Q96FA3 418 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 PPA2Q9H2U2 334 aa12.61□□□□□ -0.39
FOXR1-201ENST00000317011 IGKV1-9A0A0C4DH69 117 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 FAM230AA0A1W2PPH8 454 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 MRPS14O60783 128 aaKnown RBP12.6□□□□□ -0.39
FOXR1-201ENST00000317011 ISG15P05161 165 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 RPSAP08865 295 aaKnown RBP12.6□□□□□ -0.39
FOXR1-201ENST00000317011 KIR3DL2P43630 455 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 EFNB2P52799 333 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 WNT4P56705 351 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 DOC2BQ14184 412 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms