RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GNG3P63215 75 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 SRSF4Q08170 494 aaKnown RBP15.71■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF660Q6AZW8 331 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-201ENST00000315286 Q6ZPA2 131 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 ZNF680Q8NEM1 530 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 C1orf162Q8NEQ5 155 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-201ENST00000315286 BOD1Q96IK1 185 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 FXYD6Q9H0Q3 95 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 OPN3Q9H1Y3 402 aaPredicted RBP15.71■□□□□ 0.11
CCDC43-201ENST00000315286 LIME1Q9H400 295 aa15.71■□□□□ 0.11
CCDC43-201ENST00000315286 MAP1BP46821 2468 aaKnown RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 TRAV14DV4A0A0A6YYC5 116 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A10PA6NDY2 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 MBD3L4A6NDZ8 208 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A18PA6NE21 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 MBD3L3A6NE82 208 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A16PA6NEW6 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A20PA6NIJ5 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 MBD3L5A6NJ08 208 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A8PA6NJQ4 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A7PA6NKC0 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A22PA8MWA6 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A12PA8MX19 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A5PA8MXJ8 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A23PA8MXZ1 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 L7N2F9 121 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 CGAP01215 116 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 CD8AP01732 235 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A15PP0C7V4 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A13PP0C7W8 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A14PP0C7W9 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 FAM90A24PP0C7X0 464 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 OR5H8P0DN80 308 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 EIF2S3P41091 472 aaKnown RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 UCP2P55851 309 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 SUPT4H1P63272 117 aaKnown RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 OPCMLQ14982 345 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 CXorf67Q86X51 503 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 MBD3L2Q8NHZ7 208 aaPredicted RBP15.71■□□□□ 0.1
CCDC43-201ENST00000315286 PROCRQ9UNN8 238 aa15.71■□□□□ 0.1
CCDC43-201ENST00000315286 DBX1A6NMT0 343 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 SFT2D2O95562 160 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 IGKV3-15P01624 115 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 HOXC12P31275 282 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 PMELP40967 661 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 NHLRC3Q5JS37 347 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 CLEC18BQ6UXF7 455 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 ZNF573Q86YE8 665 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 SLC25A40Q8TBP6 338 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 MARS2Q96GW9 593 aaKnown RBP15.7■□□□□ 0.1
CCDC43-201ENST00000315286 ZNF488Q96MN9 340 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 PDCD10Q9BUL8 212 aa15.7■□□□□ 0.1
CCDC43-201ENST00000315286 SHANK1Q9Y566 2161 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 RFPL4AA6NLU0 287 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 FAM25EA8MYX2 175 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 RFPL4AL1F8VTS6 287 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 M0R233 179 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 WDR1O75083 606 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 ZNF205O95201 554 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 GMFBP60983 142 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 SURF2Q15527 256 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-201ENST00000315286 SLC9A3R2Q15599 337 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 ALKBH6Q3KRA9 238 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 TMEM211Q6ICI0 200 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 OR1J1Q8NGS3 322 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 CLEC4MQ9H2X3 399 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-201ENST00000315286 OR51I2Q9H344 312 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 C12orf4Q9NQ89 552 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 ZNF71Q9NQZ8 489 aaPredicted RBP15.69■□□□□ 0.1
CCDC43-201ENST00000315286 NECAP2Q9NVZ3 263 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 PGAM2P15259 253 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 DUSP1P28562 367 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 SLC22A25Q6T423 547 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 EXTL1Q92935 676 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 PRR13Q9NZ81 148 aa15.69■□□□□ 0.1
CCDC43-201ENST00000315286 C3orf80F5H4A9 247 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 SNAPC5O75971 98 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 RPS2P15880 293 aaKnown RBP15.68■□□□□ 0.1
CCDC43-201ENST00000315286 CALCRP30988 508 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 DHRS11Q6UWP2 260 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 RPRMLQ8N4K4 120 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 ZNF286AQ9HBT8 521 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 DECR2Q9NUI1 292 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 FAM215AQ9Y5M1 114 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 ATMQ13315 3056 aa15.68■□□□□ 0.1
CCDC43-201ENST00000315286 PRSS44E7EML9 344 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 RHBDL1O75783 438 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 CFDP00746 253 aaPredicted RBP15.67■□□□□ 0.1
CCDC43-201ENST00000315286 KNG1P01042 644 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 CRYABP02511 175 aaKnown RBP15.67■□□□□ 0.1
CCDC43-201ENST00000315286 RAC2P15153 192 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 PRKACAP17612 351 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 S100A1P23297 94 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 PTGER4P35408 488 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 IL24Q13007 206 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 PSG7Q13046 419 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 MICU1Q9BPX6 476 aa15.67■□□□□ 0.1
CCDC43-201ENST00000315286 RCC2Q9P258 522 aaKnown RBP15.67■□□□□ 0.1
CCDC43-201ENST00000315286 RP1L1Q8IWN7 2480 aaPredicted RBP15.67■□□□□ 0.1
CCDC43-201ENST00000315286 CEP295Q9C0D2 2601 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms