RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MRPL41Q8IXM3 137 aaKnown RBP15.78■□□□□ 0.12
SPSB4-201ENST00000310546 OR10A7Q8NGE5 316 aa15.78■□□□□ 0.12
SPSB4-201ENST00000310546 HDHD3Q9BSH5 251 aaPredicted RBP15.78■□□□□ 0.12
SPSB4-201ENST00000310546 FBRSQ9HAH7 460 aa15.78■□□□□ 0.12
SPSB4-201ENST00000310546 ELL3Q9HB65 397 aaPredicted RBP15.78■□□□□ 0.12
SPSB4-201ENST00000310546 COL4A2P08572 1712 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 HNRNPA2B1P22626 353 aaKnown RBP15.77■□□□□ 0.12
SPSB4-201ENST00000310546 MRPS21P82921 87 aaKnown RBP15.77■□□□□ 0.12
SPSB4-201ENST00000310546 RUNX1Q01196 453 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 PMS2P11Q13670 270 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 ZNF266Q14584 549 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 P2RY6Q15077 328 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 ANKRD39Q53RE8 183 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 OR5AS1Q8N127 324 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 SUMF1Q8NBK3 374 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 GNG13Q9P2W3 67 aa15.77■□□□□ 0.12
SPSB4-201ENST00000310546 CCDC163A0A0D9SF12 145 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 SLC33A1O00400 549 aaPredicted RBP15.77■□□□□ 0.11
SPSB4-201ENST00000310546 CTSDP07339 412 aaPredicted RBP15.77■□□□□ 0.11
SPSB4-201ENST00000310546 FOLR1P15328 257 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 NOVA1P51513 510 aaKnown RBP15.77■□□□□ 0.11
SPSB4-201ENST00000310546 NCR3LG1Q68D85 454 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 FBXL14Q8N1E6 418 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 NECAP1Q8NC96 275 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 OR5L1Q8NGL2 311 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 CLDND2Q8NHS1 167 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 RTN4IP1Q8WWV3 396 aaPredicted RBP15.77■□□□□ 0.11
SPSB4-201ENST00000310546 SLAMF6Q96DU3 332 aa15.77■□□□□ 0.11
SPSB4-201ENST00000310546 B4DEV8 164 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 IGHV4-34P06331 123 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 PPA1Q15181 289 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF506Q5JVG8 444 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 C1QL2Q7Z5L3 287 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM217Q8N7C4 229 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 HLA-CQ95604 372 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 SYT3Q9BQG1 590 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 UNC13CQ8NB66 2214 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 ZFP92A6NM28 416 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 B4DGG1 531 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 TGOLN2O43493 480 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 ONECUT2O95948 504 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 TK1P04183 234 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 CD55P08174 381 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 SFTPDP35247 375 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 IL13RA2Q14627 380 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 HERPUD1Q15011 391 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 CLEC12BQ2HXU8 276 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 SLC16A14Q7RTX9 510 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 C6orf201Q7Z4U5 140 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 FAM185AQ8N0U4 392 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 TSTD1Q8NFU3 115 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 RNF133Q8WVZ7 376 aa15.76■□□□□ 0.11
SPSB4-201ENST00000310546 NXT1Q9UKK6 140 aaKnown RBP15.76■□□□□ 0.11
SPSB4-201ENST00000310546 A0A1B0GU03 582 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 CYB5R3P00387 301 aaPredicted RBP15.75■□□□□ 0.11
SPSB4-201ENST00000310546 MYF5P13349 255 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 DUSP1P28562 367 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 ERVFC1-1P60608 527 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 BTNL3Q6UXE8 466 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF66Q6ZN08 573 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 OR2C3Q8N628 320 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 BOD1Q96IK1 185 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 WFIKKN1Q96NZ8 548 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 MYO7BQ6PIF6 2116 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 CDC14CA4D256 554 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 SCGB1D1O95968 90 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 IFI6P09912 130 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM225BP0DP42 221 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 OR2AJ1Q8NGZ0 328 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 GPR119Q8TDV5 335 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM171Q8WVE6 324 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 PECRQ9BY49 303 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 LIME1Q9H400 295 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 CDH20Q9HBT6 801 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 MCTS1Q9ULC4 181 aaKnown RBP15.75■□□□□ 0.11
SPSB4-201ENST00000310546 PCNX3Q9H6A9 2034 aa15.75■□□□□ 0.11
SPSB4-201ENST00000310546 TRBV24-1A0A075B6N3 115 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 IFNL4K9M1U5 179 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 HSPA12AO43301 675 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 RND2P52198 227 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 HNF4GQ14541 408 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 TMEM187Q14656 261 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 DMRTA1Q5VZB9 504 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 CMTM1Q8IZ96 169 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 METTL27Q8N6F8 245 aaPredicted RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 PRTFDC1Q9NRG1 225 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 GPR173Q9NS66 373 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 LRFN1Q9P244 771 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 CST7O76096 145 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 IL11P20809 199 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 GNG10P50151 68 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 MPV17LQ2QL34 196 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 DEGS2Q6QHC5 323 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 MEX3BQ6ZN04 569 aaKnown RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF705AQ6ZN79 300 aaPredicted RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 WDFY1Q8IWB7 410 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 ZNF321PQ8N8H1 164 aa15.74■□□□□ 0.11
SPSB4-201ENST00000310546 BAHD1Q8TBE0 780 aaPredicted RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 NXF5Q9H1B4 397 aaKnown RBP15.74■□□□□ 0.11
SPSB4-201ENST00000310546 GPR84Q9NQS5 396 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms