RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FAM169BQ8N8A8 192 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 KLF14Q8TD94 323 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-201ENST00000309469 MARS2Q96GW9 593 aaKnown RBP18.17■□□□□ 0.5
ATG4D-201ENST00000309469 SCGB3A2Q96PL1 93 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 MICU1Q9BPX6 476 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 RTL8AQ9BWD3 113 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 SFXN3Q9BWM7 321 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 ZNF442Q9H7R0 627 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 SLC25A15Q9Y619 301 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 TSC22D2O75157 780 aa18.16■□□□□ 0.5
ATG4D-201ENST00000309469 SLC22A5O76082 557 aa18.16■□□□□ 0.5
ATG4D-201ENST00000309469 OPRM1P35372 400 aa18.16■□□□□ 0.5
ATG4D-201ENST00000309469 AADACL3Q5VUY0 350 aa18.16■□□□□ 0.5
ATG4D-201ENST00000309469 WDR89Q96FK6 387 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-201ENST00000309469 IGHV1-18A0A0C4DH31 117 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 C9orf170A2RU37 121 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 GLI4P10075 376 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 AKR1C4P17516 323 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 TUBG1P23258 451 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 FPR2P25090 351 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 MPV17P39210 176 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 TAS2R31P59538 309 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 IGFBP7Q16270 282 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 LGALSLQ3ZCW2 172 aaPredicted RBP18.15■□□□□ 0.5
ATG4D-201ENST00000309469 C11orf88Q6PI97 169 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 PEG10Q86TG7 708 aaKnown RBP18.15■□□□□ 0.5
ATG4D-201ENST00000309469 TUBG2Q9NRH3 451 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 SPENQ96T58 3664 aaKnown RBP18.15■□□□□ 0.5
ATG4D-201ENST00000309469 MGAQ8IWI9 3026 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 FAM221AA4D161 298 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 F5H5P2 479 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 CD34P28906 385 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 IL13RA1P78552 427 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 MPV17LQ2QL34 196 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 FAM76BQ5HYJ3 339 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 TMEM211Q6ICI0 200 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 PLK3Q9H4B4 646 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 C5orf66Q9H5L9 145 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 IL36RNQ9UBH0 155 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 SLC23A1Q9UHI7 598 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 OPN4Q9UHM6 478 aa18.15■□□□□ 0.5
ATG4D-201ENST00000309469 LAMA5O15230 3695 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 J3QT63 122 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 TPD52L2O43399 206 aaKnown RBP18.14■□□□□ 0.49
ATG4D-201ENST00000309469 TMPRSS3P57727 454 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 DCAF12L2Q5VW00 463 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF767PQ75MW2 155 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 TMEM185AQ8NFB2 350 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF488Q96MN9 340 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 ADAT1Q9BUB4 502 aaKnown RBP18.14■□□□□ 0.49
ATG4D-201ENST00000309469 C12orf4Q9NQ89 552 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 DCHS1Q96JQ0 3298 aa18.14■□□□□ 0.49
ATG4D-201ENST00000309469 IGHV2OR16-5A0A0B4J2B6 119 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 OR5H14A6NHG9 310 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 PRRG2O14669 202 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 PRKACAP17612 351 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF81P51508 661 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 WDR86Q86TI4 376 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 DOLPP1Q86YN1 238 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 MITD1Q8WV92 249 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 BCL2L14Q9BZR8 327 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 RCC2Q9P258 522 aaKnown RBP18.13■□□□□ 0.49
ATG4D-201ENST00000309469 APC2O95996 2303 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 LRP5LA4QPB2 252 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 RHBDL1O75783 438 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 VAMP1P23763 118 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 CALCRP30988 508 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 DHODHQ02127 395 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 TIMM23BQ5SRD1 257 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 LILRB4Q8NHJ6 448 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 ASB13Q8WXK3 278 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 S100PBPQ96BU1 408 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 RTBDNQ9BSG5 229 aaPredicted RBP18.13■□□□□ 0.49
ATG4D-201ENST00000309469 NECAP2Q9NVZ3 263 aa18.13■□□□□ 0.49
ATG4D-201ENST00000309469 OR5H8P0DN80 308 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 IKZF1Q13422 519 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 SURF2Q15527 256 aaPredicted RBP18.12■□□□□ 0.49
ATG4D-201ENST00000309469 TMEM128Q5BJH2 165 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 LINC00596Q86U02 117 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 FAM58AQ8N1B3 248 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 SLX1AQ9BQ83 275 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF286AQ9HBT8 521 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 PURGQ9UJV8 347 aaKnown RBP18.12■□□□□ 0.49
ATG4D-201ENST00000309469 SPTBN2O15020 2390 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 GTF3C1Q12789 2109 aa18.12■□□□□ 0.49
ATG4D-201ENST00000309469 RGS11O94810 467 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 DUS4LO95620 317 aaKnown RBP18.11■□□□□ 0.49
ATG4D-201ENST00000309469 DUSP1P28562 367 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 SSTR2P30874 369 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 BAMBIQ13145 260 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 OR8G1Q15617 311 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 LY6G6FQ5SQ64 297 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 SCCPDHQ8NBX0 429 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 OR8G5Q8NG78 346 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 TMEM230Q96A57 120 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 PHB2Q99623 299 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF2Q9BSG1 426 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-201ENST00000309469 TMPRSS13Q9BYE2 586 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 RHOFQ9HBH0 211 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 TMEM100Q9NV29 134 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms