RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 DCAF12L2Q5VW00 463 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 NXNL2Q5VZ03 156 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 OR52W1Q6IF63 320 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 FAM159AQ6UWV7 190 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 VCXQ9H320 206 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 NARFLQ9H6Q4 476 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 UBTD1Q9HAC8 227 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 NECAP2Q9NVZ3 263 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 KCNG2Q9UJ96 466 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 TIMM10BQ9Y5J6 103 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 A0A1W2PPR1 153 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RAMP3O60896 148 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RAB36O95755 333 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ZNF35P13682 527 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 CDC42P60953 191 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 SNRPGP62308 76 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 HIST1H3AP68431 136 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 PSG4Q00888 419 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 DEFA6Q01524 100 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 TLE4Q04727 773 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 MED21Q13503 144 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 P2RY14Q15391 338 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 KCNJ8Q15842 424 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 HIST2H3PS2Q5TEC6 136 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ADAM5Q6NVV9 412 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 KCNIP4Q6PIL6 250 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 BTNL3Q6UXE8 466 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 HIST2H3AQ71DI3 136 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 C1orf87Q8N0U7 546 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OR11L1Q8NGX0 322 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 PIK3IP1Q96FE7 263 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 HS3ST6Q96QI5 342 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 IL4I1Q96RQ9 567 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RSG1Q9BU20 258 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OR2H1Q9GZK4 316 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ELOVL3Q9HB03 270 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 GSTK1Q9Y2Q3 226 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 LHFPL6Q9Y693 200 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 A0A1B0GV72 72 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 TVP23AA6NH52 213 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 NKX6-3A6NJ46 265 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 SHISA9B4DS77 424 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 M0R129 80 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 M0R1B8 84 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ZNF593O00488 134 aaPredicted RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 XRCC2O43543 280 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 PTHP01270 115 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 HLA-DQA2P01906 255 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ZNF823P16415 610 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 SRP9P49458 86 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 IDH3GP51553 393 aaPredicted RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 MRPS11P82912 194 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 PLP2Q04941 152 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 BAMBIQ13145 260 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 TNXAQ16473 311 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 PABPC1L2AQ5JQF8 200 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OTPQ5XKR4 325 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 SLC18B1Q6NT16 456 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 ZNF544Q6NX49 715 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 FAHD2BQ6P2I3 314 aaPredicted RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 MEPCEQ7L2J0 689 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 CALHM1Q8IU99 346 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 GJC3Q8NFK1 279 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OR1L4Q8NGR5 311 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OR6K6Q8NGW6 343 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RHOXF1Q8NHV9 184 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 OTULINQ96BN8 352 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 FAHD2AQ96GK7 314 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RNF2Q99496 336 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 NEURL2Q9BR09 285 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 TMED9Q9BVK6 235 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 PLEKHF2Q9H8W4 249 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RNF121Q9H920 327 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 IFT46Q9NQC8 304 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 SIRT7Q9NRC8 400 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 CYSLTR2Q9NS75 346 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 IMPAD1Q9NX62 359 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 GAR1Q9NY12 217 aaKnown RBP7.05□□□□□ -1.28
CHD6-201ENST00000309279 GOLT1BQ9Y3E0 138 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 RNF115Q9Y4L5 304 aa7.05□□□□□ -1.28
CHD6-201ENST00000309279 POLQO75417 2590 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 PDZD2O15018 2839 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 IGHV2OR16-5A0A0B4J2B6 119 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 IQCMA0A1B0GVH7 501 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 CCDC182A6NF36 153 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 OR6C6A6NF89 314 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 RER1O15258 196 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 SGCEO43556 437 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 SYNGR3O43761 229 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 MPZL2O60487 215 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 PLAUP00749 431 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 CRYAAP02489 173 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 STOMP27105 288 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms