RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OPN5Q6U736 354 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 LANCL3Q6ZV70 420 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 PRR22Q8IZ63 422 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 INO80EQ8NBZ0 244 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 SPSB1Q96BD6 273 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 CPNE2Q96FN4 548 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 TP53RKQ96S44 253 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 PIGQQ9BRB3 760 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 RGCCQ9H4X1 137 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 PARPBPQ9NWS1 579 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DSCAML1Q8TD84 2053 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 A0A1B0GW55 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF727A8MUV8 499 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 A8MWP6 167 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 SEC14L6B5MCN3 397 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 NPIPA5E9PKD4 350 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DHRS3O75911 302 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 JTBO76095 146 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L2P0CJ85 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L3P0CJ86 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L4P0CJ87 422 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L5P0CJ88 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L6P0CJ89 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4L7P0CJ90 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 COX6A1P12074 109 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF823P16415 610 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 NPBWR2P48146 333 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 PPM1FP49593 454 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 AIMP2Q13155 320 aaKnown RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 NKAIN1Q4KMZ8 207 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF542PQ5EBM4 170 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 KCTD9Q7L273 389 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 GPR137CQ8N3F9 429 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF614Q8N883 585 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 ZNF248Q8NDW4 579 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 OR5R1Q8NH85 324 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DNAJA3Q96EY1 480 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 LIN37Q96GY3 246 aaPredicted RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 LINC00470Q9BZP3 86 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 SMOC1Q9H4F8 434 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 BANF2Q9H503 90 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 FGF21Q9NSA1 209 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 C19orf12Q9NSK7 152 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 DUX4Q9UBX2 424 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 NPIPA1Q9UND3 350 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 MRPS17Q9Y2R5 130 aaKnown RBP4.69□□□□□ -1.66
VPS50-202ENST00000305866 DCHS1Q96JQ0 3298 aa4.69□□□□□ -1.66
VPS50-202ENST00000305866 TGIF2-C20orf24A0A0A6YYL0 155 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 A0A0G2JRQ6 117 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 A0A1W2PQM1 296 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CXorf65A6NEN9 183 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SDCBPO00560 298 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 KLF7O75840 302 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 TUSC2O75896 110 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CSN2P05814 226 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 UMODP07911 640 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 H2BFMP0C1H6 154 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 LIFP15018 202 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GZMHP20718 246 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GLIPR1P48060 266 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 DSCR4P56555 118 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 GABREP78334 506 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ID3Q02535 119 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 PRSS8Q16651 343 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ACSF3Q4G176 576 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 HLA-DQA1Q5Y7H0 255 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 ZNF880Q6PDB4 577 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 LYZL2Q7Z4W2 148 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GAPTQ8N292 157 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SEMA6DQ8NFY4 1073 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 OR9K2Q8NGE7 335 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SLC22A8Q8TCC7 542 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CA5BP1Q8WTZ4 195 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 MOB3AQ96BX8 217 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 RAB3CQ96E17 227 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TPSD1Q9BZJ3 242 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 PRM3Q9NNZ6 103 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 MRPS28Q9Y2Q9 187 aaKnown RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 LOC100509620A0A075B734 347 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GPR137BO60478 399 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 RNF224P0DH78 156 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GZMBP10144 247 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 COX5BP10606 129 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 NDUFB7P17568 137 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 GLP1RP43220 463 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 EMP2P54851 167 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 TLE3Q04726 772 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CLINT1Q14677 625 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 SWI5Q1ZZU3 235 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 C16orf47Q6ZP98 133 aaPredicted RBP4.68□□□□□ -1.66
VPS50-202ENST00000305866 UEVLDQ8IX04 471 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 OR13C9Q8NGT0 318 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 CASTOR1Q8WTX7 329 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 MAFIPQ8WZ33 124 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 FRZBQ92765 325 aa4.68□□□□□ -1.66
VPS50-202ENST00000305866 RAB39BQ96DA2 213 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms