RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TBPP20226 339 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 NXPH1P58417 271 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 PCBD1P61457 104 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 SSX2Q16385 188 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 TFAP2EQ6VUC0 442 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 GCNT2Q8N0V5 402 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 ERRFI1Q9UJM3 462 aaPredicted RBP11.68□□□□□ -0.54
CASC4-201ENST00000299957 E9PQ18 207 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 PABPC1L2AQ5JQF8 200 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 OR10J5Q8NHC4 309 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 NRIP2Q9BQI9 281 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 UBE2ZQ9H832 354 aaPredicted RBP11.68□□□□□ -0.54
CASC4-201ENST00000299957 CCDC187A0A096LP49 1063 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 CTRB1P17538 263 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 MEOX2P50222 304 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 P2RY4P51582 365 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 CTRB2Q6GPI1 263 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 SPINK14Q6IE38 97 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 OR2T2Q6IF00 324 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 OVCH2Q7RTZ1 564 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
CASC4-201ENST00000299957 DNAJB11Q9UBS4 358 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 HDGFL3Q9Y3E1 203 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 TIMM10BQ9Y5J6 103 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 PHOX2AO14813 284 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 UBE2G2P60604 165 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 SLC25A45Q8N413 288 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 ZNF814B7Z6K7 855 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 DEGS1O15121 323 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 YIF1AO95070 293 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 IFNA4P05014 189 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 AADACP22760 399 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 DUSP3P51452 185 aaPredicted RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 SSTP61278 116 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 ROM1Q03395 351 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 ZNF528Q3MIS6 628 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 SLC2A9Q9NRM0 540 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 GNG12Q9UBI6 72 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 NKX2-6A6NCS4 301 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 TERTO14746 1132 aaKnown RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 TAAR5O14804 337 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 ALKBH6Q3KRA9 238 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 FIP1L1Q6UN15 594 aaKnown RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 RABEPKQ7Z6M1 372 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 MYPOPQ86VE0 399 aaPredicted RBP11.67□□□□□ -0.54
CASC4-201ENST00000299957 LHX4Q969G2 390 aa11.67□□□□□ -0.54
CASC4-201ENST00000299957 DEFB108AA8MXU0 73 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 GPR137BO60478 399 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 IFNA1P01562 189 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 FABP1P07148 127 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 FBP1P09467 338 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 TLE4Q04727 773 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 RHBDD2Q6NTF9 364 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 LINC00114Q6XXX2 140 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 ALX4Q9H161 411 aaPredicted RBP11.66□□□□□ -0.54
CASC4-201ENST00000299957 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 ZNF319Q9P2F9 582 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 A0A1W2PPV4 95 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 IFNA10P01566 189 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 FABP6P51161 128 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
CASC4-201ENST00000299957 EDDM3BP56851 147 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 ZNF154Q13106 437 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 MPV17LQ2QL34 196 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 SNAI3Q3KNW1 292 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 OR1J1Q8NGS3 322 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 ZNF519Q8TB69 540 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 FUT3P21217 361 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 SCAND1P57086 179 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 MRPL49Q13405 166 aaKnown RBP11.66□□□□□ -0.54
CASC4-201ENST00000299957 UBE2V2Q15819 145 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 RBMS3Q6XE24 437 aaKnown RBP11.66□□□□□ -0.54
CASC4-201ENST00000299957 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 SCARF2Q96GP6 870 aaPredicted RBP11.66□□□□□ -0.54
CASC4-201ENST00000299957 GDF15Q99988 308 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 GBF1Q92538 1859 aa11.66□□□□□ -0.54
CASC4-201ENST00000299957 VAMP5O95183 116 aa11.65□□□□□ -0.54
CASC4-201ENST00000299957 FABP4P15090 132 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms