RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 OR2K2Q8NGT1 345 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 GABRG3Q99928 467 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 VAX2Q9UIW0 290 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 GPX5O75715 221 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 C1orf105O95561 183 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 AAED1Q7RTV5 226 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 MOGAT3Q86VF5 341 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 ABHD3Q8WU67 409 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 MBLAC1A4D2B0 266 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 ZFAND5O76080 213 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 ZNF542PQ5EBM4 170 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 RNF165Q6ZSG1 346 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 PTX4Q96A99 478 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 SIGMAR1Q99720 223 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 OPN1LWP04000 364 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 GPR150Q8NGU9 434 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 NIPSNAP1Q9BPW8 284 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 RHNO1Q9BSD3 238 aa10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 ELF5Q9UKW6 265 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-201ENST00000299633 EIF1BO60739 113 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 PPP1CAP62136 330 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 RCC2Q9P258 522 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 COL8A1P27658 744 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 SSR4P51571 173 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 OR8G5Q8NG78 346 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 TREX1Q9NSU2 369 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 LOC107986453A0A1B0GWG9 222 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 GPNMBQ14956 572 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 WDFY1Q8IWB7 410 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 WDR92Q96MX6 357 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 SMIM21Q3B7S5 101 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 SLC36A1Q7Z2H8 476 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 CBLN2Q8IUK8 224 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 SNRNP40Q96DI7 357 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 ELOVL5Q9NYP7 299 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 MGAT2Q10469 447 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 TP53I13Q8NBR0 393 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 PYCR3Q53H96 274 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 CACNG5Q9UF02 275 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 DMRT1Q9Y5R6 373 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 TYMSP04818 313 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 OR10G4Q8NGN3 311 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 OR10G9Q8NGN4 311 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 OR10G7Q8NGN6 311 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 STARD5Q9NSY2 213 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 FITM1A5D6W6 292 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 WDR83Q9BRX9 315 aaKnown RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 MBPP02686 304 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 ZNF480Q8WV37 535 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 CALHM2Q9HA72 323 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 ZNF250P15622 560 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 CTF1Q16619 201 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 TMED3Q9Y3Q3 217 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 GPR179Q6PRD1 2367 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
HDGFL3-201ENST00000299633 OPRM1P35372 400 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 TCEAL8Q8IYN2 117 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 NANOGP1Q8N7R0 232 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 DCTDP32321 178 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 PIANPQ8IYJ0 282 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 GBGT1Q8N5D6 347 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 LOC285556D6RIA3 1793 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 PYCARD-AS1I3L0S3 204 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 PTGESO14684 152 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 CD74P04233 296 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 COX20Q5RI15 118 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 NUFIP2Q7Z417 695 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 SAP30LQ9HAJ7 183 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 PTPN13Q12923 2485 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 GNG7O60262 68 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 IGFBP7Q16270 282 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 PABPC1L2AQ5JQF8 200 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 RAB33BQ9H082 229 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 DEFB110Q30KQ9 67 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 ZDHHC22Q8N966 263 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 SMAD6O43541 496 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 DRD1P21728 446 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 SLC38A5Q8WUX1 472 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 HHIPQ96QV1 700 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 CDC42EP3Q9UKI2 254 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 LCTP09848 1927 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 A0A1W2PQU0 124 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 CXorf1O96002 111 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 DYNLT3P51808 116 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 BHLHE23Q8NDY6 225 aa10.04□□□□□ -0.8
HDGFL3-201ENST00000299633 TRMT61AQ96FX7 289 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms