RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 C20orf24Q9BUV8 137 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 PAPOLGQ9BWT3 736 aaKnown RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 PARP12Q9H0J9 701 aaKnown RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 SH3BGRL3Q9H299 93 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 PLEKHF2Q9H8W4 249 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 MYOTQ9UBF9 498 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 SRP19P09132 144 aaKnown RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 GLB1P16278 677 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 NHLH2Q02577 135 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 BAXQ07812 192 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 TGIF1Q15583 401 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 TMEM42Q69YG0 159 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 CADM4Q8NFZ8 388 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 OR52M1Q8NGK5 317 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 SGK3Q96BR1 496 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 RBMXL1Q96E39 390 aaKnown RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 TMEM56Q96MV1 263 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 TMEM56-RWDD3S4R434 201 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 ELOA3CA0A087WX78 387 aaPredicted RBP16.65■□□□□ 0.26
TRA2A-201ENST00000297071 CCDC187A0A096LP49 1063 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 TRDCB7Z8K6 153 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 F5H5K5 113 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 RPL36A-HNRNPH2H7BZ11 118 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 DHHO43323 396 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 DIRAS3O95661 229 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 HBE1P02100 147 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 CRYGSP22914 178 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 FHITP49789 147 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 TMEM182Q6ZP80 229 aaPredicted RBP16.65■□□□□ 0.26
TRA2A-201ENST00000297071 SLC35E3Q7Z769 313 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 MR1Q95460 341 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 TOMM40LQ969M1 308 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 TECTBQ96PL2 329 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 MTCH2Q9Y6C9 303 aa16.65■□□□□ 0.26
TRA2A-201ENST00000297071 FAM230AA0A1W2PPH8 454 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 OR5H15A6NDH6 313 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 SEC14L6B5MCN3 397 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 XRCC2O43543 280 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 RAMP1O60894 148 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 PIAS2O75928 621 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 OR13C7P0DN81 318 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 PNLIPP16233 465 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 OR2B8PP59922 312 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 MRPS34P82930 218 aaKnown RBP16.64■□□□□ 0.25
TRA2A-201ENST00000297071 RAB35Q15286 201 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 SP6Q3SY56 376 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 FAM27BQ5VT28 67 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 TMEM123Q8N131 208 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 HSD17B11Q8NBQ5 300 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
TRA2A-201ENST00000297071 PIGBOS1A0A0B4J2F0 54 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 HSD17B6O14756 317 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 ATP6V0CP27449 155 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 DLX2Q07687 328 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 KRTAP27-1Q3LI81 207 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 TMEM176BQ3YBM2 270 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 OR2B11Q5JQS5 317 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 ZNF600Q6ZNG1 722 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 DBX2Q6ZNG2 339 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 OR10G3Q8NGC4 313 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 OR2G3Q8NGZ4 309 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 SPACA9Q96E40 222 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FBXO17Q96EF6 278 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 LYRM2Q9NU23 88 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FOXD3Q9UJU5 478 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 NXT1Q9UKK6 140 aaKnown RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 RANBP2P49792 3224 aaKnown RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 TRAV1-1A0A0B4J248 108 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A10PA6NDY2 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A18PA6NE21 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A16PA6NEW6 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A20PA6NIJ5 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A8PA6NJQ4 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A7PA6NKC0 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A22PA8MWA6 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A12PA8MX19 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A5PA8MXJ8 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A23PA8MXZ1 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 H3BQ15 152 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 C1QL1O75973 258 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A15PP0C7V4 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A13PP0C7W8 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A14PP0C7W9 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 FAM90A24PP0C7X0 464 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 S100A2P29034 98 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 RBP2P50120 134 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 HERV-K104P61576 105 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 OR8G1Q15617 311 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 TAF9Q16594 264 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 NKAIN1Q4KMZ8 207 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 KHDC3LQ587J8 217 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 ZNF574Q6ZN55 896 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 PPP1R3BQ86XI6 285 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 DTX1Q86Y01 620 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 OSR2Q8N2R0 312 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 ZNF610Q8N9Z0 462 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-201ENST00000297071 TVP23CQ96ET8 276 aa16.63■□□□□ 0.25
TRA2A-201ENST00000297071 BCL2L14Q9BZR8 327 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms