RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ANKRD55Q3KP44 614 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 MYPOPQ86VE0 399 aaPredicted RBP8.05□□□□□ -1.12
PRDM9-201ENST00000296682 RTN4IP1Q8WWV3 396 aaPredicted RBP8.05□□□□□ -1.12
PRDM9-201ENST00000296682 OR10C1Q96KK4 312 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 HS3ST6Q96QI5 342 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 PCSK5Q92824 1860 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 GTF3C1Q12789 2109 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 KMT2EQ8IZD2 1858 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 IGKV1-12A0A0C4DH73 117 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 TUBAL3A6NHL2 446 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 H3BUI4 141 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 RBMXL2O75526 392 aaKnown RBP8.05□□□□□ -1.12
PRDM9-201ENST00000296682 IGKV1D-12P01611 117 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 IGHV3-13P01766 116 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 IGHV3-7P01780 117 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 RRASP10301 218 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 M6PRP20645 277 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 CTSSP25774 331 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 PDZK1IP1Q13113 114 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 SLC51BQ86UW2 128 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 OR10AD1Q8NGE0 317 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF552Q9H707 407 aaPredicted RBP8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZGRF1Q86YA3 2104 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 A0A0U1RQV5 110 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 MFNGO00587 321 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 CCL1P22362 96 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 FBXW12Q6X9E4 464 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 OR2W3Q7Z3T1 314 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 EXTL1Q92935 676 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF286AQ9HBT8 521 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 WRBO00258 174 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 LILRA1O75019 489 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CELA3BP08861 270 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 LHX2P50458 406 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 TAS2R31P59538 309 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 OR2B11Q5JQS5 317 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 LINC00052Q96N35 136 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 FN3KRPQ9HA64 309 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 MED9Q9NWA0 146 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 OR5AC2Q9NZP5 309 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ANXA10Q9UJ72 324 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 TRAV14DV4A0A0A6YYC5 116 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CYTIPO60759 359 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUS4LO95620 317 aaKnown RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 IFNA2P01563 188 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 TFF1P04155 84 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CD74P04233 296 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 OR5AC1P0C628 307 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 PRF1P14222 555 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 FUT6P51993 359 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 PPA1Q15181 289 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 SCARB1Q8WTV0 552 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 MITD1Q8WV92 249 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 EMG1Q92979 244 aaKnown RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 MRPL24Q96A35 216 aaKnown RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 SPSB1Q96BD6 273 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 C1orf147Q96MC9 270 aaPredicted RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 SLC2A8Q9NY64 477 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 RNF150Q9ULK6 438 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 A0A1B0GW55 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CD300LBA8K4G0 201 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 SERPINE3A8MV23 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 B8ZZF3 427 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 C21orf140B9A014 251 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 LRP3O75074 770 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L2P0CJ85 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L3P0CJ86 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L4P0CJ87 422 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L5P0CJ88 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L6P0CJ89 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4L7P0CJ90 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CLDN18P56856 261 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF616Q08AN1 781 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 CLINT1Q14677 625 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF660Q6AZW8 331 aaPredicted RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 RPUSD3Q6P087 351 aaKnown RBP8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ACOT7LQ6ZUV0 252 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 LHFPL2Q6ZUX7 228 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 MDP1Q86V88 176 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ZDHHC23Q8IYP9 409 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 ARRDC1Q8N5I2 433 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 HSD17B11Q8NBQ5 300 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DDA1Q9BW61 102 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 DUX4Q9UBX2 424 aa8.04□□□□□ -1.12
PRDM9-201ENST00000296682 HLA-GP17693 338 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 CBX5P45973 191 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 GFRA1P56159 465 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 HIST1H3AP68431 136 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 MPPED2Q15777 294 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 SWI5Q1ZZU3 235 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 HIST2H3PS2Q5TEC6 136 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms