RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ERVS71-1P61550 626 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 UNQ6126/PRO20091Q6UXV3 157 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 BTN2A1Q7KYR7 527 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 NANPQ8TBE9 248 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 ARHGAP5-AS1Q96IT6 56 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 HIST1H2AAQ96QV6 131 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 NUDT15Q9NV35 164 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 NDRG3Q9UGV2 375 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 PURGQ9UJV8 347 aaKnown RBP13.32□□□□□ -0.28
LSM6-201ENST00000296581 PRR14LQ5THK1 2151 aa13.32□□□□□ -0.28
LSM6-201ENST00000296581 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 AKAIN1P0CW23 69 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 RAD52P43351 418 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 RAG2P55895 527 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 FGL1Q08830 312 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 SFRP4Q6FHJ7 346 aaPredicted RBP13.31□□□□□ -0.28
LSM6-201ENST00000296581 TRAPPC6BQ86SZ2 158 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 SAXO1Q8IYX7 474 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 ZNF611Q8N823 705 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 Q8NFD4 153 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 OR51F2Q8NH61 342 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 NUDCD2Q8WVJ2 157 aa13.31□□□□□ -0.28
LSM6-201ENST00000296581 MRPS24Q96EL2 167 aaKnown RBP13.31□□□□□ -0.28
LSM6-201ENST00000296581 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
LSM6-201ENST00000296581 OR5B21A6NL26 309 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 IQCF6A8MYZ5 107 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 ZNF732B4DXR9 585 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 H2AFB1P0C5Y9 115 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 H2AFB2P0C5Z0 115 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 SELEP16581 610 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 GPM6AP51674 278 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 FAAP20Q6NZ36 180 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 BVESQ8NE79 360 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 BIN3Q9NQY0 253 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 JKAMPQ9P055 326 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 ANAPC10Q9UM13 185 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 RP1L1Q8IWN7 2480 aaPredicted RBP13.3□□□□□ -0.28
LSM6-201ENST00000296581 C7orf66A4D0T2 115 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 EEF1E1-BLOC1S5C9J1V9 151 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 CD74P04233 296 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 CD3DP04234 171 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 CXCL3P19876 107 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 BLVRBP30043 206 aaPredicted RBP13.3□□□□□ -0.28
LSM6-201ENST00000296581 ARL6IP1Q15041 203 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 STEAP1BQ6NZ63 245 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 SLC25A26Q70HW3 274 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 C1orf174Q8IYL3 243 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 DVL3Q92997 716 aaPredicted RBP13.3□□□□□ -0.28
LSM6-201ENST00000296581 PECRQ9BY49 303 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 ELOVL5Q9NYP7 299 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 PFDN2Q9UHV9 154 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 SH3BGRL2Q9UJC5 107 aa13.3□□□□□ -0.28
LSM6-201ENST00000296581 CA11O75493 328 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 CYB5AP00167 134 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 SFTPBP07988 381 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 DNASE1P24855 282 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 CALCRP30988 508 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 NAAAQ02083 359 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 PSG7Q13046 419 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 OSR2Q8N2R0 312 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
LSM6-201ENST00000296581 OR56B4Q8NH76 319 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 KLF14Q8TD94 323 aaPredicted RBP13.29□□□□□ -0.28
LSM6-201ENST00000296581 POM121Q96HA1 1249 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 DMRTA2Q96SC8 542 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 VKORC1Q9BQB6 163 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 ACTR6Q9GZN1 396 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 APOC3P02656 99 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 NMBP08949 121 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 CA6P23280 308 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 GNG3P63215 75 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 FAM27E3Q08E93 113 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 PPA1Q15181 289 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 MUCL1Q96DR8 90 aa13.29□□□□□ -0.28
LSM6-201ENST00000296581 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
LSM6-201ENST00000296581 SERPINE3A8MV23 424 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 DHFRP00374 187 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 MPV17P39210 176 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 ELP2Q6IA86 826 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 OR8S1Q8NH09 359 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 ZNF251Q9BRH9 671 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 C20orf85Q9H1P6 137 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 HSF4Q9ULV5 492 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 ZNF736B4DX44 427 aaPredicted RBP13.28□□□□□ -0.28
LSM6-201ENST00000296581 NDUFB6O95139 128 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 RAB3DO95716 219 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 GABRR1P24046 479 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 CCKARP32238 428 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 ZNF83P51522 516 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 HFEQ30201 348 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 ALKBH6Q3KRA9 238 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 TMEM211Q6ICI0 200 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 HSD17B13Q7Z5P4 300 aaPredicted RBP13.28□□□□□ -0.28
LSM6-201ENST00000296581 ZNF573Q86YE8 665 aa13.28□□□□□ -0.28
LSM6-201ENST00000296581 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms