RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ACKR3P25106 362 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 MDH2P40926 338 aaKnown RBP10.15□□□□□ -0.78
HMGB2-201ENST00000296503 ACTC1P68032 377 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 ACTA1P68133 377 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 PRDX4Q13162 271 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 DYRK1AQ13627 763 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 ZMYND11Q15326 602 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 TRAM1Q15629 374 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 CHRFAM7AQ494W8 412 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 TP53I3Q53FA7 332 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 FAM201AQ5SY85 155 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 FAM220AQ7Z4H9 259 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 GLCCI1Q86VQ1 547 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 PLPP7Q8NBV4 271 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 SEMA6DQ8NFY4 1073 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 OR51F2Q8NH61 342 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 ZNF436Q9C0F3 470 aaPredicted RBP10.15□□□□□ -0.78
HMGB2-201ENST00000296503 MOB1AQ9H8S9 216 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 G6PC2Q9NQR9 355 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 C1orf123Q9NWV4 160 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 EXOGQ9Y2C4 368 aaKnown RBP10.15□□□□□ -0.78
HMGB2-201ENST00000296503 PPIAL4AQ9Y536 164 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 MPC1Q9Y5U8 109 aa10.15□□□□□ -0.78
HMGB2-201ENST00000296503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.15□□□□□ -0.791e-12■■■■□ 26.4
HMGB2-201ENST00000296503 A8MXK9 166 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 CTDSPLO15194 276 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 SRSF10O75494 262 aaKnown RBP10.15□□□□□ -0.79
HMGB2-201ENST00000296503 SCO1O75880 301 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 MPC2O95563 127 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 PAHP00439 452 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 TTRP02766 147 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 TCRBP04435 133 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 MSMBP08118 114 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 LIMS3P0CW19 117 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 LIMS4P0CW20 117 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 PRKACAP17612 351 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 PITPNBP48739 271 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 S100A12P80511 92 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 ZNF85Q03923 595 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 ODF4Q2M2E3 257 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 TMEM155Q4W5P6 130 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 BTN2A1Q7KYR7 527 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 MUC20Q8N307 709 aaPredicted RBP10.15□□□□□ -0.79
HMGB2-201ENST00000296503 ACBD7Q8N6N7 88 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 DEFB108BQ8NET1 73 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 OR5T2Q8NGG2 359 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 Q8TCH9 128 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 TMEM186Q96B77 213 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 PHF21AQ96BD5 680 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 CMTM3Q96MX0 182 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 ABCG5Q9H222 651 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 HIF1ANQ9NWT6 349 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 TMEM160Q9NX00 188 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 CDC42EP3Q9UKI2 254 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 SLC22A13Q9Y226 551 aa10.15□□□□□ -0.79
HMGB2-201ENST00000296503 NF1P21359 2839 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 ZNF816-ZNF321PA0A0X1KG74 233 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 P2RY10O00398 339 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 PLPP2O43688 288 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 TSC22D2O75157 780 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 TMEM127O75204 238 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 PTBP3O95758 552 aaKnown RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 CST4P01036 141 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 IGHA1P01876 353 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 RAB3AP20336 220 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 PSMB10P40306 273 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 DVL1P1P54792 670 aaPredicted RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 CR1LQ2VPA4 569 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 FAM120AOSQ5T036 256 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 ZNF826PQ6ZT77 177 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 LINC00518Q8N0U6 118 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 OR56B4Q8NH76 319 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 MRPL48Q96GC5 212 aaKnown RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 POM121Q96HA1 1249 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 DPCDQ9BVM2 203 aaPredicted RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 RTL8AQ9BWD3 113 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 PATZ1Q9HBE1 687 aaKnown RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 RDH8Q9NYR8 311 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 EXTL2Q9UBQ6 330 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 ZMAT5Q9UDW3 170 aaKnown RBP10.14□□□□□ -0.79
HMGB2-201ENST00000296503 PIGLQ9Y2B2 252 aa10.14□□□□□ -0.79
HMGB2-201ENST00000296503 J3QLW9 94 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 J3QRE1 110 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 GABRPO00591 440 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 GSTZ1O43708 216 aaPredicted RBP10.13□□□□□ -0.79
HMGB2-201ENST00000296503 ZNF19P17023 458 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 ELK1P19419 428 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 HNF1AP20823 631 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
HMGB2-201ENST00000296503 PITPNAQ00169 270 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 SFRP4Q6FHJ7 346 aaPredicted RBP10.13□□□□□ -0.79
HMGB2-201ENST00000296503 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
HMGB2-201ENST00000296503 MOB3CQ70IA8 216 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 HSD17B13Q7Z5P4 300 aaPredicted RBP10.13□□□□□ -0.79
HMGB2-201ENST00000296503 LHFPL3Q86UP9 236 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 CATSPERDQ86XM0 798 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 ZDHHC23Q8IYP9 409 aa10.13□□□□□ -0.79
HMGB2-201ENST00000296503 MS4A15Q8N5U1 240 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms