RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 LRRC75AQ8NAA5 344 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 PIK3IP1Q96FE7 263 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 SFXN1Q9H9B4 322 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ICAM5Q9UMF0 924 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 TMED3Q9Y3Q3 217 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 MRPL58Q14197 206 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 OR2Y1Q8NGV0 311 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 PDE6DO43924 150 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 HFEQ30201 348 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 GVQW1Q8N7I0 195 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 SLC17A5Q9NRA2 495 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 PTPRFP10586 1907 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 CYR61O00622 381 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ADIPOQQ15848 244 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF141Q15928 474 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 DCAF12L2Q5VW00 463 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 KIDINS220Q9ULH0 1771 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 BCAT2O15382 392 aaPredicted RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 EMDP50402 254 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 LIM2P55344 173 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 PDLIM5Q96HC4 596 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
SHROOM3-201ENST00000296043 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 FOLR3P41439 243 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 SGMS2Q8NHU3 365 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 LANCL1O43813 399 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 PGA3P0DJD8 388 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 DLX1P56177 255 aa10.52□□□□□ -0.72
SHROOM3-201ENST00000296043 BLACEA4D250 179 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 RFLNAQ6ZTI6 216 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 PARP11Q9NR21 331 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 IL13RA2Q14627 380 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 PDCD1Q15116 288 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 PLXDC1Q8IUK5 500 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 RIMBP3CA6NJZ7 1639 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 RIMBP3BA6NNM3 1639 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 RIMBP3Q9UFD9 1639 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 STAG3L3P0CL85 134 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 PARLQ9H300 379 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM147Q9BVK8 224 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 PFN3P60673 137 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 MORN1Q5T089 497 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF346Q9UL40 294 aaKnown RBP10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 SERPINE3A8MV23 424 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 CD74P04233 296 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 SMIM13P0DJ93 91 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 FBXL14Q8N1E6 418 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 MOB3AQ96BX8 217 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 SH2D2AQ9NP31 389 aa10.52□□□□□ -0.73
SHROOM3-201ENST00000296043 P01737 135 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 OR10V1Q8NGI7 309 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 ZC3HAV1LQ96H79 300 aaKnown RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM131LA2VDJ0 1609 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 CCL14Q16627 93 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 C1orf185Q5T7R7 199 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 WIPI2Q9Y4P8 454 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 PLA2G10O15496 165 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 CD226Q15762 336 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 SSMEM1Q8WWF3 244 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 C1SP09871 688 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 MPLP40238 635 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 OR10S1Q8NGN2 331 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 POM121L2Q96KW2 1035 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 RIGQ13278 110 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 HPP00738 406 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 THBS4P35443 961 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM25Q86YD3 366 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 SIGLEC11Q96RL6 698 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 CFDP00746 253 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 GP1BAP07359 652 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 OR1D5P58170 312 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 LIAT1Q6ZQX7 453 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 C5orf17Q8NAS9 161 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 H3BNC9 293 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 SMPD2O60906 423 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 C12orf73Q69YU5 71 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM108Q6UXF1 575 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 Q6ZSR6 202 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 DOLPP1Q86YN1 238 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 CADM4Q8NFZ8 388 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 CLDN23Q96B33 292 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms