RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 C12orf4Q9NQ89 552 aa8.7□□□□□ -1.02
C9orf43-201ENST00000288462 PTPRZ1P23471 2315 aaPredicted RBP8.7□□□□□ -1.02
C9orf43-201ENST00000288462 DCHS1Q96JQ0 3298 aa8.7□□□□□ -1.02
C9orf43-201ENST00000288462 MGAQ8IWI9 3026 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 OR7C1O76099 320 aaPredicted RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 TUBG1P23258 451 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 IL32P24001 234 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 CD34P28906 385 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SNRPD2P62316 118 aaKnown RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SRSF4Q08170 494 aaKnown RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SURF2Q15527 256 aaPredicted RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 LPCAT3Q6P1A2 487 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 HAGHLQ6PII5 290 aaPredicted RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 Q6ZPA2 131 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 WDR86Q86TI4 376 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 LINC00596Q86U02 117 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 OR5M8Q8NGP6 311 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 TMEM230Q96A57 120 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 MARS2Q96GW9 593 aaKnown RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SCGB3A2Q96PL1 93 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SFXN3Q9BWM7 321 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 TUBG2Q9NRH3 451 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SLC25A15Q9Y619 301 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 IGHV1-18A0A0C4DH31 117 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SDCBPO00560 298 aaPredicted RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SLC22A5O76082 557 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 SIX6O95475 246 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 DUS4LO95620 317 aaKnown RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 GSTT2P0CG29 244 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 PPP3CBP16298 524 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 HLA-GP17693 338 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 ECI1P42126 302 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 NPY4RP50391 375 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 ARPC4P59998 168 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 PSG7Q13046 419 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 FAM76BQ5HYJ3 339 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 TMEM211Q6ICI0 200 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 BATF2Q8N1L9 274 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 UXS1Q8NBZ7 420 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 MICU1Q9BPX6 476 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 ADAT1Q9BUB4 502 aaKnown RBP8.69□□□□□ -1.02
C9orf43-201ENST00000288462 PLK3Q9H4B4 646 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 RHOFQ9HBH0 211 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 DECR2Q9NUI1 292 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 IL36RNQ9UBH0 155 aa8.69□□□□□ -1.02
C9orf43-201ENST00000288462 IGHV2OR16-5A0A0B4J2B6 119 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 LRP5LA4QPB2 252 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 OR5H14A6NHG9 310 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 OPRM1P35372 400 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 MPV17P39210 176 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 IL13RA2Q14627 380 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 ALKBH6Q3KRA9 238 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 LGALSLQ3ZCW2 172 aaPredicted RBP8.68□□□□□ -1.02
C9orf43-201ENST00000288462 TMEM128Q5BJH2 165 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 C11orf88Q6PI97 169 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF474Q6S9Z5 364 aaPredicted RBP8.68□□□□□ -1.02
C9orf43-201ENST00000288462 UNQ6126/PRO20091Q6UXV3 157 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 Q6ZS49 121 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 KLF14Q8TD94 323 aaPredicted RBP8.68□□□□□ -1.02
C9orf43-201ENST00000288462 EXTL1Q92935 676 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 SLX1AQ9BQ83 275 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 RTBDNQ9BSG5 229 aaPredicted RBP8.68□□□□□ -1.02
C9orf43-201ENST00000288462 C1QTNF6Q9BXI9 259 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 ITGB1BP2Q9UKP3 347 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 BOD1L1Q8NFC6 3051 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 PLSCR5A0PG75 271 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 GLI4P10075 376 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 AKR1C4P17516 323 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 CALCRP30988 508 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 IL13RA1P78552 427 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 PDCD1Q15116 288 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 SRSF7Q16629 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
C9orf43-201ENST00000288462 C3orf36Q3SXR2 165 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 PHB2Q99623 299 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 BCL2L14Q9BZR8 327 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF442Q9H7R0 627 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 IFT22Q9H7X7 185 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF286AQ9HBT8 521 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 NECAP2Q9NVZ3 263 aa8.68□□□□□ -1.02
C9orf43-201ENST00000288462 SVILO95425 2214 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 A0A0B4J2A0 478 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 TMEM210A6NLX4 147 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 SFT2D2O95562 160 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 NAPSAO96009 420 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 CD8AP01732 235 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 OR5H8P0DN80 308 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 PRKACAP17612 351 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 KITLGP21583 273 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 VAMP1P23763 118 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 TIMM23BQ5SRD1 257 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 SLC22A25Q6T423 547 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 C1orf174Q8IYL3 243 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 FAM58AQ8N1B3 248 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 ZNF488Q96MN9 340 aa8.67□□□□□ -1.02
C9orf43-201ENST00000288462 DHRS9Q9BPW9 319 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms