RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 M0QZK8 103 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 NME4O00746 187 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 NUPL2O15504 423 aaKnown RBP3.72□□□□□ -1.81
CD44-202ENST00000278385 SPRY3O43610 288 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ZG16O60844 167 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 FKBP6O75344 327 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 MED6O75586 246 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OR2B3O76000 313 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 SLC22A5O76082 557 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ALPLP05186 524 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RNF224P0DH78 156 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 HLA-DOBP13765 273 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ZNF30P17039 623 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RAB5AP20339 215 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 KDELR1P24390 212 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 GRPRP30550 384 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RPA3P35244 121 aaPredicted RBP3.72□□□□□ -1.81
CD44-202ENST00000278385 IFNGR2P38484 337 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RFX2P48378 723 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 AMTP48728 403 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RPL26P61254 145 aaKnown RBP3.72□□□□□ -1.81
CD44-202ENST00000278385 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
CD44-202ENST00000278385 ECH1Q13011 328 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OR2F1Q13607 317 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 FAM53BQ14153 422 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 IRF4Q15306 451 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 SLC1A5Q15758 541 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 CYP51A1Q16850 503 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 DEFB133Q30KQ1 61 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 FHL5Q5TD97 284 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 PRSS41Q7RTY9 318 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 CBLN2Q8IUK8 224 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 SVOPLQ8N434 492 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 NATD1Q8N6N6 113 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OR5AR1Q8NGP9 310 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 FNDC8Q8TC99 324 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 MAPK15Q8TD08 544 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 FGF11Q92914 225 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RCN3Q96D15 328 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OR10C1Q96KK4 312 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ZNF597Q96LX8 424 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 COL21A1Q96P44 957 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ZIM3Q96PE6 472 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RNF157Q96PX1 679 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 VAT1Q99536 393 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RASL11BQ9BPW5 248 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 DHRS9Q9BPW9 319 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 OSBPL11Q9BXB4 747 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 CSTL1Q9H114 145 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 TPK1Q9H3S4 243 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 PRORYQ9H606 182 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 REEP1Q9H902 201 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 ADGRL4Q9HBW9 690 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 AMBNQ9NP70 447 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RBM22Q9NW64 420 aaKnown RBP eCLIP3.72□□□□□ -1.81
CD44-202ENST00000278385 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 CES1P1Q9UKY3 287 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 HHLA2Q9UM44 414 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 RPL26L1Q9UNX3 145 aaKnown RBP3.72□□□□□ -1.81
CD44-202ENST00000278385 ALG5Q9Y673 324 aa3.72□□□□□ -1.81
CD44-202ENST00000278385 MUC22E2RYF6 1773 aaPredicted RBP3.71□□□□□ -1.81
CD44-202ENST00000278385 CEP250Q9BV73 2442 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 CFAP54Q96N23 3096 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 CENPVL3A0A0U1RRI6 287 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 FAM166BA8MTA8 275 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 K7EMT4 169 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SULT2B1O00204 365 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 FABP7O15540 132 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 BUB3O43684 328 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 UGT2B11O75310 529 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 TOMM40O96008 361 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 CD48P09326 243 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 OR5AL1P0C617 328 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SLC2A2P11168 524 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 HOXB6P17509 224 aaKnown RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 SDC1P18827 310 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 ELK4P28324 431 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 HTR1EP28566 365 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 CCKARP32238 428 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SOX3P41225 446 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 RPL5P46777 297 aaKnown RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 TTPAP49638 278 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SULT1A1P50225 295 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SULT1A2P50226 295 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 UBE2E1P51965 193 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 LIM2P55344 173 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 KRTAP10-11P60412 298 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 MAXP61244 160 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 PSPHP78330 225 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 HLA-DRB5Q30154 266 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 TPTE2P1Q5T6R2 138 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 NCBP2-AS2Q69YL0 99 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 GUSBP11Q6P575 273 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SPSB3Q6PJ21 355 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms