RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ZNF766Q5HY98 468 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 GGNBP1Q5YKI7 109 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 ST7LQ8TDW4 575 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 ZPBPQ9BS86 351 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 UNKLQ9H9P5 680 aaKnown RBP12.55□□□□□ -0.4
TMEM47-201ENST00000275954 G6PC2Q9NQR9 355 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 TP53TG5Q9Y2B4 290 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 SPEGQ15772 3267 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 TANC1Q9C0D5 1861 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 J3QRE1 110 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 FAM87AP0C7U9 286 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 PDZK1IP1Q13113 114 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 RPL7L1Q6DKI1 246 aaKnown RBP12.55□□□□□ -0.4
TMEM47-201ENST00000275954 HAS2Q92819 552 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 PRRX2Q99811 253 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 DOCK10Q96BY6 2186 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 HMSDA8MTL9 139 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 PDCD6O75340 191 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 CRHP06850 196 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 ZNF266Q14584 549 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 LCN15Q6UWW0 184 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 TCTEX1D2Q8WW35 142 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 WDR54Q9H977 334 aa12.55□□□□□ -0.4
TMEM47-201ENST00000275954 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
TMEM47-201ENST00000275954 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
TMEM47-201ENST00000275954 TRANK1O15050 2925 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 IFNA1P01562 189 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 IGHV3-7P01780 117 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 HPNP05981 417 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 CD59P13987 128 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 UBE2KP61086 200 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 CDCP2Q5VXM1 449 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 TIPARPQ7Z3E1 657 aaKnown RBP12.54□□□□□ -0.4
TMEM47-201ENST00000275954 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 RPS4Y2Q8TD47 263 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 TGIF2Q9GZN2 237 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 GFOD1Q9NXC2 390 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 PRR19A6NJB7 356 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 TXNL1O43396 289 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 CATR1Q13166 79 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 MSMO1Q15800 293 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 SLC25A42Q86VD7 318 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 C14orf79Q96F83 325 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 GPR160Q9UJ42 338 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 IGHV1-45A0A0A0MS14 117 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 E5RGE8 158 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 ATG12O94817 140 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 IFNA10P01566 189 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 PLAURQ03405 335 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 TLE1Q04724 770 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 SIGIRRQ6IA17 410 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 TMEM123Q8N131 208 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 OR10Z1Q8NGY1 313 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 FAM122AQ96E09 287 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 DHRS9Q9BPW9 319 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 FAM206AQ9NX38 181 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 AK3Q9UIJ7 227 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
TMEM47-201ENST00000275954 ACTL6BO94805 426 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 MPPED2Q15777 294 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 HGDQ93099 445 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 TMEM38BQ9NVV0 291 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 OR6C65A6NJZ3 312 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 PTGER4P35408 488 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 PCOLCEQ15113 449 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GFRALQ6UXV0 394 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 ZNF488Q96MN9 340 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GPHA2Q96T91 129 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GCM1Q9NP62 436 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GNG3P63215 75 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 C17orf78Q8N4C9 275 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GPR137Q96N19 417 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 POLDIP2Q9Y2S7 368 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 GBF1Q92538 1859 aa12.53□□□□□ -0.4
TMEM47-201ENST00000275954 KRASP01116 189 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 CHATP28329 748 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 PSG4Q00888 419 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.4
TMEM47-201ENST00000275954 C2orf68Q2NKX9 166 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 BPIFCQ8NFQ6 507 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 OR14K1Q8NGZ2 314 aa12.52□□□□□ -0.4
TMEM47-201ENST00000275954 MRPL24Q96A35 216 aaKnown RBP12.52□□□□□ -0.4
TMEM47-201ENST00000275954 IP6K3Q96PC2 410 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms